G629001


Basic Information

Item Value
gene id G629001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58640672 ~ 58641472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715187
tcaccatgaacAATGTCAAGCGTCGGCTAGAGTGATGtgaagcttgccgccattggactctggagtagtggaaaagcgttctctggagtgatgaatcacgcttcaccatctggcagcccGACGGACATACCttggtttggtggatgccaggagaacgctacctgccccaatgcatagtgccaactgtaaagtttggtgcagAAGGAATAatgctctggggctgtttttcatagttctggctaggccccttagttccagtaaagggaaatcttaatgctacagcatacaatgacattctagaagattctgtgctaccaactttgtggcaacagtttggggaaggccttttcttgtttcagcatgacaatgcccccgtgcacaaagcgaggtccatacagaaatctgcacagagccctgacctcaaccccatcgaacaccttgggatgaattggaacgctgaatgcaagccaggcctactcttccaacatcagtgcccgacctcactaatgctcttgaagctgaatggaagcaagtcccagcagcaatgttccaacatctagtggaaagccttcccagaagagtcaATGTTATTAtatcagcaaagggggggaccaactccattttaatgcctatgattttgtaatgagatgttcgaggagcaggtgtctacatacttttggttttgtagtttATCGCATAATGTACAAATACTACAACAGTCTACATAATTAAGCCAACAAAGTAGGCCAACAGATGAATTAAAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU715187 True 765 lncRNA 0.46 2 58640672 58641472

Neighbor

gene id symbol gene type direction distance location
LOC110528080 NA coding downstream 11409 58627335 ~ 58629263 (-)
LOC110528074 LOC106583092 coding downstream 21571 58591066 ~ 58619101 (-)
LOC110528071 LOC106583097 coding downstream 183814 58452974 ~ 58456858 (-)
LOC110528070 LOC106583098 coding downstream 188445 58440240 ~ 58452227 (-)
LOC110528069 LOC106583062 coding downstream 203518 58425680 ~ 58437154 (-)
ccnd3 LOC106583090 coding upstream 14337 58655809 ~ 58662211 (-)
LOC110528082 LOC106583086 coding upstream 40259 58681731 ~ 58687794 (-)
LOC110528083 LOC106583085 coding upstream 51756 58691817 ~ 58695856 (-)
sfrs3 sfrs3 coding upstream 66806 58707572 ~ 58713630 (-)
LOC118965303 LOC106565665 coding upstream 202207 58843679 ~ 58845368 (-)
G628997 NA non-coding downstream 20038 58620334 ~ 58620634 (-)
G628996 NA non-coding downstream 20877 58619565 ~ 58619795 (-)
G628988 NA non-coding downstream 51682 58587072 ~ 58588990 (-)
G628969 NA non-coding downstream 72810 58566568 ~ 58567862 (-)
G628966 NA non-coding downstream 77641 58562403 ~ 58563031 (-)
G629117 strip1 non-coding upstream 171322 58812794 ~ 58816065 (-)
G629124 NA non-coding upstream 179996 58821468 ~ 58823848 (-)
G629056 LOC106583079 non-coding upstream 196366 58837838 ~ 58848423 (-)
LOC110528090 LOC106583075 non-coding upstream 249655 58890001 ~ 58895798 (-)
G628714 NA other downstream 522550 58117190 ~ 58118122 (-)
G628575 LOC106579815 other downstream 767341 57872050 ~ 57873331 (-)
LOC110528040 NA other downstream 1582102 57052191 ~ 57059527 (-)
vamp3 vamp3 other downstream 1771221 56853567 ~ 56869607 (-)
G630132 NA other upstream 1105978 59747450 ~ 59752591 (-)
G630227 NA other upstream 1274507 59915979 ~ 59917551 (-)
G630747 NA other upstream 1441574 60083046 ~ 60083857 (-)

Expression


Co-expression Network