Gene
RNA
| Item | Value |
|---|---|
| gene id | G629117 |
| gene name | strip1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58812794 ~ 58816065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| strip1 | Acts upstream of or within heart contraction. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in cardiac ventricle. Orthologous to human STRIP1 (striatin interacting protein 1). |
| description |
|---|
| PREDICTED: striatin-interacting protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU715338 | True | 1349 | lncRNA | 0.41 | 4 | 58812794 | 58816065 |
58,807,000
58,808,000
58,809,000
58,810,000
58,811,000
58,812,000
58,812,000
58,813,000
58,814,000
58,815,000
58,816,000
58,817,000
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sfrs3 | sfrs3 | coding | downstream | 99164 | 58707572 ~ 58713630 (-) |
| LOC110528083 | LOC106583085 | coding | downstream | 116938 | 58691817 ~ 58695856 (-) |
| LOC110528082 | LOC106583086 | coding | downstream | 125000 | 58681731 ~ 58687794 (-) |
| ccnd3 | LOC106583090 | coding | downstream | 150583 | 58655809 ~ 58662211 (-) |
| LOC110528080 | NA | coding | downstream | 183531 | 58627335 ~ 58629263 (-) |
| LOC118965303 | LOC106565665 | coding | upstream | 27614 | 58843679 ~ 58845368 (-) |
| LOC110528983 | LOC106565665 | coding | upstream | 30402 | 58846467 ~ 58868216 (-) |
| LOC110528090 | LOC106583075 | coding | upstream | 73936 | 58890001 ~ 58895798 (-) |
| LOC110528094 | LOC106583073 | coding | upstream | 132391 | 58948456 ~ 58970820 (-) |
| eps8l3a | LOC106583072 | coding | upstream | 206629 | 59022694 ~ 59037726 (-) |
| G629001 | NA | non-coding | downstream | 171322 | 58640672 ~ 58641472 (-) |
| G628997 | NA | non-coding | downstream | 192160 | 58620334 ~ 58620634 (-) |
| G628996 | NA | non-coding | downstream | 192999 | 58619565 ~ 58619795 (-) |
| G628988 | NA | non-coding | downstream | 223804 | 58587072 ~ 58588990 (-) |
| G629124 | NA | non-coding | upstream | 5403 | 58821468 ~ 58823848 (-) |
| G629056 | LOC106583079 | non-coding | upstream | 21773 | 58837838 ~ 58848423 (-) |
| G629152 | NA | non-coding | upstream | 92169 | 58908234 ~ 58908581 (-) |
| G629185 | NA | non-coding | upstream | 108285 | 58924350 ~ 58924635 (-) |
| LOC110528069 | LOC106583062 | other | downstream | 383423 | 58425680 ~ 58437154 (-) |
| G628714 | NA | other | downstream | 694672 | 58117190 ~ 58118122 (-) |
| G628575 | LOC106579815 | other | downstream | 939463 | 57872050 ~ 57873331 (-) |
| G630132 | NA | other | upstream | 931385 | 59747450 ~ 59752591 (-) |
| G630227 | NA | other | upstream | 1099914 | 59915979 ~ 59917551 (-) |
| G630747 | NA | other | upstream | 1266981 | 60083046 ~ 60083857 (-) |
| LOC110528989 | LOC106583145 | other | upstream | 1922430 | 60699279 ~ 60822525 (-) |
| G631740 | NA | other | upstream | 2374643 | 61190708 ~ 61191045 (-) |
