Gene
RNA
| Item | Value |
|---|---|
| gene id | G629152 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58908234 ~ 58908581 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| retrotransposable element Tf2-like protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU715374 | True | 348 | lncRNA | 0.53 | 1 | 58908234 | 58908581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528090 | LOC106583075 | coding | downstream | 12436 | 58890001 ~ 58895798 (-) |
| LOC110528983 | LOC106565665 | coding | downstream | 40018 | 58846467 ~ 58868216 (-) |
| LOC118965303 | LOC106565665 | coding | downstream | 62866 | 58843679 ~ 58845368 (-) |
| sfrs3 | sfrs3 | coding | downstream | 194604 | 58707572 ~ 58713630 (-) |
| LOC110528083 | LOC106583085 | coding | downstream | 212378 | 58691817 ~ 58695856 (-) |
| LOC110528094 | LOC106583073 | coding | upstream | 39875 | 58948456 ~ 58970820 (-) |
| eps8l3a | LOC106583072 | coding | upstream | 114113 | 59022694 ~ 59037726 (-) |
| LOC110528098 | LOC106583071 | coding | upstream | 134690 | 59043271 ~ 59047897 (-) |
| LOC110528100 | mep50 | coding | upstream | 176521 | 59085102 ~ 59094461 (-) |
| LOC110527129 | LOC106583068 | coding | upstream | 190694 | 59099275 ~ 59105032 (-) |
| G629056 | LOC106583079 | non-coding | downstream | 59811 | 58837838 ~ 58848423 (-) |
| G629124 | NA | non-coding | downstream | 84386 | 58821468 ~ 58823848 (-) |
| G629117 | strip1 | non-coding | downstream | 92169 | 58812794 ~ 58816065 (-) |
| ccnd3 | LOC106583090 | non-coding | downstream | 251044 | 58655809 ~ 58662211 (-) |
| G629185 | NA | non-coding | upstream | 15769 | 58924350 ~ 58924635 (-) |
| G629187 | gnai3 | non-coding | upstream | 17377 | 58925958 ~ 58932436 (-) |
| G629190 | NA | non-coding | upstream | 26537 | 58935118 ~ 58935510 (-) |
| G629193 | NA | non-coding | upstream | 30234 | 58938815 ~ 58939103 (-) |
| G629197 | NA | non-coding | upstream | 33363 | 58941944 ~ 58942164 (-) |
| LOC110528069 | LOC106583062 | other | downstream | 478863 | 58425680 ~ 58437154 (-) |
| G628714 | NA | other | downstream | 790112 | 58117190 ~ 58118122 (-) |
| G628575 | LOC106579815 | other | downstream | 1034903 | 57872050 ~ 57873331 (-) |
| G630132 | NA | other | upstream | 838869 | 59747450 ~ 59752591 (-) |
| G630227 | NA | other | upstream | 1007398 | 59915979 ~ 59917551 (-) |
| G630747 | NA | other | upstream | 1174465 | 60083046 ~ 60083857 (-) |
| LOC110528989 | LOC106583145 | other | upstream | 1829914 | 60699279 ~ 60822525 (-) |
| G631740 | NA | other | upstream | 2282127 | 61190708 ~ 61191045 (-) |
