G629165


Basic Information

Item Value
gene id G629165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58922236 ~ 58922541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715390
TATGCCGTCTTCTTGTTTTACACCTGAGGGTGTGGGAAATCCATCTGTACGCTATTCATTAACACGCACACAAGCAAATGATACTTTGTAAAGAGACTGGATTGCGTGATAAAATTTCCCTTCAACCCCTGTCTTTAACAAACTATATGCTAAAAGATCCCTATTTACAAAATCAAAAGCTTTCTGGAAATCAGTGAAACGTGCAAAAGTAGGCTTCTCTTCATGTGATCAATTTCCAATTATTGTACAGACCGAAAATATatgatctacagtatgtaggCTTTGGATTTACGAAAACCATTTTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU715390 True 306 lncRNA 0.36 1 58922236 58922541

Neighbor

gene id symbol gene type direction distance location
LOC110528092 LOC106583074 coding upstream 1406 58915182 ~ 58920830 (+)
LOC110528091 LOC106583076 coding upstream 32525 58878933 ~ 58889711 (+)
LOC110528089 LOC106583079 coding upstream 80917 58835280 ~ 58841319 (+)
LOC110528088 LOC106583080 coding upstream 87933 58825054 ~ 58834303 (+)
LOC110528087 LOC106583081 coding upstream 106150 58804760 ~ 58816086 (+)
LOC110528093 gnai3 coding downstream 3399 58925940 ~ 58932441 (+)
LOC110528095 LOC106565671 coding downstream 47185 58969726 ~ 59022859 (+)
LOC110528097 LOC106583070 coding downstream 112532 59035073 ~ 59042858 (+)
LOC110528099 LOC106583069 coding downstream 146096 59068637 ~ 59084729 (+)
LOC110528104 LOC106565516 coding downstream 347121 59269662 ~ 59293823 (+)
G628572 NA non-coding upstream 15544 58906427 ~ 58906692 (+)
G628566 NA non-coding upstream 27304 58891128 ~ 58894932 (+)
G628478 NA non-coding upstream 69584 58843280 ~ 58852652 (+)
G628476 NA non-coding upstream 203588 58712897 ~ 58718648 (+)
G629170 NA non-coding downstream 10186 58932727 ~ 58933102 (+)
G629171 NA non-coding downstream 11403 58933944 ~ 58934154 (+)
G629174 NA non-coding downstream 15292 58937833 ~ 58938061 (+)
G629175 NA non-coding downstream 15922 58938463 ~ 58938711 (+)
G629178 NA non-coding downstream 20577 58943118 ~ 58943555 (+)
G628468 LOC106583084 other upstream 208652 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 418159 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 930364 57917801 ~ 58055214 (+)
G627035 NA other upstream 1326185 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1599215 57319669 ~ 57323047 (+)
G629678 NA other downstream 761790 59684331 ~ 59684763 (+)
G629679 NA other downstream 762331 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 783412 59705922 ~ 59712261 (+)

Expression


Co-expression Network