G629170


Basic Information

Item Value
gene id G629170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58932727 ~ 58933102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715397
ctcaaggacattcagagacttgtcccgaagccactcctgttttgtcttggctgtgtgcttagggtcgttgtcctgttggaaggtaaaactttgccccagtctggtcctgagtactctggagcaggttttcatcgacAACCTTTTAAATGAACATAAAGAGACCTataagcagttgttacaacaagaAAATAGTTTCAAGTGTTTTGTTCAAATACTCGTGGATTCTactaataaaagaatggacgacctgaccagagaggtccaggacctgaagaacagtttgcagttctcccagtgTCAGCTCGACAAGTTGAAACAGAACGGCAAGATGACATCAGTTCTGtctgaatccatgataacaatgagAGATCTCGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC102778332

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU715397 True 376 lncRNA 0.44 1 58932727 58933102

Neighbor

gene id symbol gene type direction distance location
LOC110528093 gnai3 coding upstream 286 58925940 ~ 58932441 (+)
LOC110528092 LOC106583074 coding upstream 11897 58915182 ~ 58920830 (+)
LOC110528091 LOC106583076 coding upstream 43016 58878933 ~ 58889711 (+)
LOC110528089 LOC106583079 coding upstream 91408 58835280 ~ 58841319 (+)
LOC110528088 LOC106583080 coding upstream 98424 58825054 ~ 58834303 (+)
LOC110528095 LOC106565671 coding downstream 36624 58969726 ~ 59022859 (+)
LOC110528097 LOC106583070 coding downstream 101971 59035073 ~ 59042858 (+)
LOC110528099 LOC106583069 coding downstream 135535 59068637 ~ 59084729 (+)
LOC110528104 LOC106565516 coding downstream 336560 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 365940 59299042 ~ 59317047 (+)
G629165 NA non-coding upstream 10186 58922236 ~ 58922541 (+)
G628572 NA non-coding upstream 26035 58906427 ~ 58906692 (+)
G628566 NA non-coding upstream 37795 58891128 ~ 58894932 (+)
G628478 NA non-coding upstream 80075 58843280 ~ 58852652 (+)
G629171 NA non-coding downstream 842 58933944 ~ 58934154 (+)
G629174 NA non-coding downstream 4731 58937833 ~ 58938061 (+)
G629175 NA non-coding downstream 5361 58938463 ~ 58938711 (+)
G629178 NA non-coding downstream 10016 58943118 ~ 58943555 (+)
G629179 NA non-coding downstream 10693 58943795 ~ 58944217 (+)
G628468 LOC106583084 other upstream 219143 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 428650 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 940855 57917801 ~ 58055214 (+)
G627035 NA other upstream 1336676 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1609706 57319669 ~ 57323047 (+)
G629678 NA other downstream 751229 59684331 ~ 59684763 (+)
G629679 NA other downstream 751770 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 772851 59705922 ~ 59712261 (+)

Expression


Co-expression Network