G629199


Basic Information

Item Value
gene id G629199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58947286 ~ 58947683 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715434
gctaatagggatcctaCTAAAATTCCAATACcaaatctttccctcgatcctgactagtctcccagtccctgccgctgaaaacatcccaCCATGCATCACCATAGGGAGGGGGTCATATTTCCTtgagatgtgatgcttggcattcaggccaaagagttcaatcttggtttcatccgaccagagaatcttgcttctcatggcctgagagtcaactccaagtgggctgtcatgtgccttttactgaggagtggcttccgcctggccactaccataaaggcttgattggtggagtgctgcagagatggttgtccttctggaaggttatcccatatCCACAGAGAACCTCTGACAATAAGTGACCATCgggtacttggtcacctccctgaccaaggcctttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU715434 True 398 lncRNA 0.49 1 58947286 58947683

Neighbor

gene id symbol gene type direction distance location
LOC110528093 gnai3 coding upstream 14845 58925940 ~ 58932441 (+)
LOC110528092 LOC106583074 coding upstream 26456 58915182 ~ 58920830 (+)
LOC110528091 LOC106583076 coding upstream 57575 58878933 ~ 58889711 (+)
LOC110528089 LOC106583079 coding upstream 105967 58835280 ~ 58841319 (+)
LOC110528088 LOC106583080 coding upstream 112983 58825054 ~ 58834303 (+)
LOC110528095 LOC106565671 coding downstream 22043 58969726 ~ 59022859 (+)
LOC110528097 LOC106583070 coding downstream 87390 59035073 ~ 59042858 (+)
LOC110528099 LOC106583069 coding downstream 120954 59068637 ~ 59084729 (+)
LOC110528104 LOC106565516 coding downstream 321979 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 351359 59299042 ~ 59317047 (+)
G629179 NA non-coding upstream 3069 58943795 ~ 58944217 (+)
G629178 NA non-coding upstream 3731 58943118 ~ 58943555 (+)
G629175 NA non-coding upstream 8575 58938463 ~ 58938711 (+)
G629174 NA non-coding upstream 9225 58937833 ~ 58938061 (+)
G629171 NA non-coding upstream 13132 58933944 ~ 58934154 (+)
G629200 NA non-coding downstream 36 58947719 ~ 58947937 (+)
G629201 NA non-coding downstream 767 58948450 ~ 58952778 (+)
G629314 NA non-coding downstream 102618 59050301 ~ 59050520 (+)
G629319 NA non-coding downstream 106898 59054581 ~ 59055253 (+)
G629355 NA non-coding downstream 156720 59104403 ~ 59104626 (+)
G628468 LOC106583084 other upstream 233702 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 443209 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 955414 57917801 ~ 58055214 (+)
G627035 NA other upstream 1351235 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1624265 57319669 ~ 57323047 (+)
G629678 NA other downstream 736648 59684331 ~ 59684763 (+)
G629679 NA other downstream 737189 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 758270 59705922 ~ 59712261 (+)

Expression


Co-expression Network