G629201


Basic Information

Item Value
gene id G629201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58948450 ~ 58952778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715436
GGCAGTTTCTATGTCGATCTTTATTTTGAATGTCTTATCTTTCGCAAGACCGGTCAGAGTTACAGGTTCAATTGTCAATAGTCAAAATGAAATATACATGTACATCACTAGTCACTGATGTTGAACATTTTGATACATATTTTAATATTAATATATAAGGCCCACTAATCTACTATTGTATTTACAAAATACTTTGCTAACTTGTTTTGAGGGTACTTTTTCTTAAATTCCAGTTTAGACCTGGCTATTTGAACTCACTGATTGGAATTAGCTAAATATGTTTTTTTGCTGTGTTACATCTGGTGTAAAACAGTAGGCATATCCAAACAGAGTTCTAATTTGAGATACTTAGAACTAGATAAAAACATTATAAATCATGGGGCAAGAGCAATGTTACTGGAAATGACTTCACTCTGACCATGTTGAGTAAGATGGCTCACCTCAAAACATATTATTTCCTAAGTTTATCAATAGGAGTCCTGAGCAGCTTTGGACACTTTCCTCAACACAAACCCATCATAAAGAACCAGAAATAATTCAGAATAACAAAGTACCTACATCAAACAAGTGTTAATTCTGCTGTTCTTCTGACTTCTCATCCTCATTTCCATCTGAAGGACATCATCATCCACATTGTCTCCAGGAGGGACATGTTGCCATCTTTGTTCGATTTGTTGGATATGATGTGTGTTAACTCCCTTTGGAGTAAATTGGGTGCTGTTCCCTAGTGTTTGCATTCATTACTCATCATTTAGGGTGTCAGGAGTTAGGAAGGAAGGGATGGGATAGTCTAGAATTGAAGGGTCTGAAGAGTCTTATGCCATTACAGAGCCTTCTGTTGTGCATTCTGTTCCTACCGCTCAACTTCAACATGAATCCAAGTGAAGGGATGAGGGGGAAAATAAAATCTTTTTTTGTGTTTCTGCTTAGAACAGACCGCAAGATTTTAGGTTCTCTTTGATAATGATGTCTGTCACGGCTCCGAACACAATCTCAACATTCTTTGTGTCCGTGGCGCAGGTCAAGTGAGAGTAGATTTCTTTGACACCCTTCTTCATGTTCAGCTCCTCAAACTGCTTCTTGATGTAGTCGCTGG
>TU715437
GGCAGTTTCTATGTCGATCTTTATTTTGAATGTCTTATCTTTCGCAAGACCGGTCAGAGTTACAGGTTCAATTGTCAATAGTCAAAATGAAATATACATGTACATCACTAGTCACTGATGTTGAACATTTTGATACATATTTTAATATTAATATATAAGGCCCACTAATCTACTATTGTATTTACAAAATACTTTGCTAACTTGTTTTGAGGGTACTTTTTCTTAAATTCCAGTTTAGACCTGGCTATTTGAACTCACTGATTGGAATTAGCTAAATATGTTTTTTTGCTGTGTTACATCTGGTGTAAAACAGTAGGCATATCCAAACAGAGTTCTAATTTGAGATACTTAGAACTAGATAAAAACATTATAAATCATGGGGCAAGAGCAATGTTACTGGAAATGACTTCACTCTGACCATGTTGAGTAAGATGGCTCACCTCAAAACATATTATTTCCTAAGTTTATCAATAGGAGTCCTGAGCAGCTTTGGACACTTTCCTCAACACAAACCCATCATAAAGAACCAGAAATAATTCAGAATAACAAAGTACCTACATCAAACAAGTGTTAATTCTGCTGTTCTTCTGACTTCTCATCCTCATTTCCATCTGAAGGACATCATCATCCACATTGTCTCCAGGAGGGACATGTTGCCATCTTTGTTCGATTTGTTGGATATGATGTGTGTTAACTCCCTTTGGAGTAAATTGGGTGCTGTTCCCTAGTGTTTGCATTCATTACTCATCATTTAGGGTGTCAGGAGTTAGGAAGGAAGGGATGGGATAGTCTAGAATTGAAGGGTCTGAAGAGTCTTATGCCATTACAGAGCCTTCTGTTGTGCATTCTGTTCCTACCGCTCAACTTCAACATGAATCCAAGTGAAGGGATGAGGGGGAAAATAAAATCTTTTTTTGTGTTTCTGCTTAGAACAGACCGCAAGATTTTAGGTTCTCTTTGATAATGATGTCTGTCACGGCTCCGAACACAATCTCAACATTCTTTGTGTCCGTGGCGCAGGTCAAGTGAGAGTAGATTTCTTTGACACCCTTCTTCATGTTCAGCTCCTCAAACTGCTTCTTGATGTAGTCGCTGGCATCATCATACGTGTTGGGGCCATCGTAGTCGGGGAAGCAGATGCTTAGGTGGACCTTCTTGATTTTCTCCTCGAAAAGATCCTTCTTGTTGAGGAAGAGTACGATGGAGGTGGTGGCGAAGAACCTGTGGTTGCAGATACTGTTGAACAGGTGAAGAGACTCATGCATACGGTTCACTTCATCGTCCTCTACAAGCACCATGTCATAAGCACTGAGGGCTCCGCAGAAGATGATGCAGGTTACACCCTCAAAACAATGGATCCACTTCTTTCTCTCCGACCGCTGGCCGCCCACATCGAACATCCTGTCAGGGGGGATGGGTTAAAAAAGGGAGATGTTAGATATGACTGTAAAGAGATAATCAACGATTGTGCAAAATCACACCCCAAAGGAAATGGAATGAACATGCAAGGATGTATGGAAGACCACTTTAGGCCCTTTGTGGTCTCCCTTGTTTGGCTAATAT
>TU715438
GGCAGTTTCTATGTCGATCTTTATTTTGAATGTCTTATCTTTCGCAAGACCGGTCAGAGTTACAGGTTCAATTGTCAATAGTCAAAATGAAATATACATGTACATCACTAGTCACTGATGTTGAACATTTTGATACATATTTTAATATTAATATATAAGGCCCACTAATCTACTATTGTATTTACAAAATACTTTGCTAACTTGTTTTGAGGGTACTTTTTCTTAAATTCCAGTTTAGACCTGGCTATTTGAACTCACTGATTGGAATTAGCTAAATATGTTTTTTTGCTGTGTTACATCTGGTGTAAAACAGTAGGCATATCCAAACAGAGTTCTAATTTGAGATACTTAGAACTAGATAAAAACATTATAAATCATGGGGCAAGAGCAATGTTACTGGAAATGACTTCACTCTGACCATGTTGAGTAAGATGGCTCACCTCAAAACATATTATTTCCTAAGTTTATCAATAGGAGTCCTGAGCAGCTTTGGACACTTTCCTCAACACAAACCCATCATAAAGAACCAGAAATAATTCAGAATAACAAAGTACCTACATCAAACAAGTGTTAATTCTGCTGTTCTTCTGACTTCTCATCCTCATTTCCATCTGAAGGACATCATCATCCACATTGTCTCCAGGAGGGACATGTTGCCATCTTTGTTCGATTTGTTGGATATGATGTGTGTTAACTCCCTTTGGAGTAAATTGGGTGCTGTTCCCTAGTGTTTGCATTCATTACTCATCATTTAGGGTGTCAGGAGTTAGGAAGGAAGGGATGGGATAGTCTAGAATTGAAGGGTCTGAAGAGTCTTATGCCATTACAGAGCCTTCTGTTGTGCATTCTGTTCCTACCGCTCAACTTCAACATGAATCCAAGTGAAGGGATGAGGGGGAAAATAAAATCTTTTTTGTGTTTCTGCTTAGAACAGACCGCAAGATTTTAGGTTCTCTTTGATAATGATGTCTGTCACGGCTCCGAACACAATCTCAACATTCTTTGTGTCCGTGGCGCAGGTCAAGTGAGAGTAGATTTCTTTGACACCCTTCTTCATGTTCAGCTCCTCAAACTGCTTCTTGATGTAGTCGCTGG
>TU715439
GGCAGTTTCTATGTCGATCTTTATTTTGAATGTCTTATCTTTCGCAAGACCGGTCAGAGTTACAGGTTCAATTGTCAATAGTCAAAATGAAATATACATGTACATCACTAGTCACTGATGTTGAACATTTTGATACATATTTTAATATTAATATATAAGGCCCACTAATCTACTATTGTATTTACAAAATACTTTGCTAACTTGTTTTGAGGGTACTTTTTCTTAAATTCCAGTTTAGACCTGGCTATTTGAACTCACTGATTGGAATTAGCTAAATATGTTTTTTTGCTGTGTTACATCTGGTGTAAAACAGTAGGCATATCCAAACAGAGTTCTAATTTGAGATACTTAGAACTAGATAAAAACATTATAAATCATGGGGCAAGAGCAATGTTACTGGAAATGACTTCACTCTGACCATGTTGAGTAAGATGGCTCACCTCAAAACATATTATTTCCTAAGTTTATCAATAGGAGTCCTGAGCAGCTTTGGACACTTTCCTCAACACAAACCCATCATAAAGAACCAGAAATAATTCAGAATAACAAAGTACCTACATCAAACAAGTGTTAATTCTGCTGTTCTTCTGACTTCTCATCCTCATTTCCATCTGAAGGACATCATCATCCACATTGTCTCCAGGAGGGACATGTTGCCATCTTTGTTCGATTTGTTGGATATGATGTGTGTTAACTCCCTTTGGAGTAAATTGGGTGCTGTTCCCTAGTGTTTGCATTCATTACTCATCATTTAGGGTGTCAGGAGTTAGGAAGGAAGGGATGGGATAGTCTAGAATTGAAGGGTCTGAAGAGTCTTATGCCATTACAGAGCCTTCTGTTGTGCATTCTGTTCCTACCGCTCAACTTCAACATGAATCCAAGTGAAGGGATGAGGGGGAAAATAAAATCTTTTTTGTGTTTCTGCTTAGAACAGACCGCAAGATTTTAGGTTCTCTTTGATAATGATGTCTGTCACGGCTCCGAACACAATCTCAACATTCTTTGTGTCCGTGGCGCAGGTCAAGTGAGAGTAGATTTCTTTGACACCCTTCTTCATGTTCAGCTCCTCAAACTGCTTCTTGATGTAGTCGCTGGCATCATCATACGTGTTGGGGCCATCGTAGTCGGGGAAGCAGATGCTTAGGTGGACCTTCTTGATTTTCTCCTCGAAAAGATCCTTCTTGTTGAGGAAGAGTACGATGGAGGTGGTGGCGAAGAACCTGTGGTTGCAGATACTGTTGAACAGGTGAAGAGACTCATGCATACGGTTCACTTCATCGTCCTCTACAAGCACCATGTCATAAGCACTGAGGGCTCCGCAGAAGATGATGCAGGTTACACCCTCAAAACAATGGATCCACTTCTTTCTCTCCGACCGCTGGCCGCCCACATCGAACATCCTGTCAGGGGGGATGGGTTAAAAAAGGGAGATGTTAGATATGACTGTAAAGAGATAATCAACGATTGTGCAAAATCACACCCCAAAGGAAATGGAATGAACATGCAAGGATGTATGGAAGACCACTTTAGGCCCTTTGTGGTCTCCCTTGTTTGGCTAATAT

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(t) subunit alpha-2-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU715436 False 1096 lncRNA 0.38 2 58948450 58949817
TU715437 False 1563 lncRNA 0.41 4 58948450 58952778
TU715438 False 1095 lncRNA 0.38 2 58948450 58949817
TU715439 True 1562 lncRNA 0.41 4 58948450 58952778
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528093 gnai3 coding upstream 16009 58925940 ~ 58932441 (+)
LOC110528092 LOC106583074 coding upstream 27620 58915182 ~ 58920830 (+)
LOC110528091 LOC106583076 coding upstream 58739 58878933 ~ 58889711 (+)
LOC110528089 LOC106583079 coding upstream 107131 58835280 ~ 58841319 (+)
LOC110528088 LOC106583080 coding upstream 114147 58825054 ~ 58834303 (+)
LOC110528095 LOC106565671 coding downstream 16948 58969726 ~ 59022859 (+)
LOC110528097 LOC106583070 coding downstream 82295 59035073 ~ 59042858 (+)
LOC110528099 LOC106583069 coding downstream 115859 59068637 ~ 59084729 (+)
LOC110528104 LOC106565516 coding downstream 316884 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 346264 59299042 ~ 59317047 (+)
G629200 NA non-coding upstream 513 58947719 ~ 58947937 (+)
G629199 NA non-coding upstream 767 58947286 ~ 58947683 (+)
G629179 NA non-coding upstream 4233 58943795 ~ 58944217 (+)
G629178 NA non-coding upstream 4895 58943118 ~ 58943555 (+)
G629175 NA non-coding upstream 9739 58938463 ~ 58938711 (+)
G629314 NA non-coding downstream 97523 59050301 ~ 59050520 (+)
G629319 NA non-coding downstream 101803 59054581 ~ 59055253 (+)
G629355 NA non-coding downstream 151625 59104403 ~ 59104626 (+)
G629356 NA non-coding downstream 152618 59105396 ~ 59105630 (+)
G629359 NA non-coding downstream 158056 59110834 ~ 59111043 (+)
G628468 LOC106583084 other upstream 234866 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 444373 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 956578 57917801 ~ 58055214 (+)
G627035 NA other upstream 1352399 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1625429 57319669 ~ 57323047 (+)
G629678 NA other downstream 731553 59684331 ~ 59684763 (+)
G629679 NA other downstream 732094 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 753175 59705922 ~ 59712261 (+)

Expression

G629201 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G629201 Expression in each Bioproject

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G629201 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network