G629264


Basic Information

Item Value
gene id G629264
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58959423 ~ 58960761 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715525
ggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggtcaagatgttcaaatgttcataaatgaccagcatggtcgaataataataaggcagaacagttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtattcctggggcatggtcctagggctcaggtcagttgaaactggaattGGGTTAATGGGTTAATAATTGGGTTaccaagcctaaataagttcaggataaaaaaaatgtgcttaacaagtcatataataagttgcatggactcactctgtatgcaataatagtgtttaacattacttttgaatgactacctcatctctgtaccccacacatacaatgatctgtaatatccctcagtcgagcattgaatttcaaacacagattcaaccacaaagaccaaggaggtttaccaatgcctcacaaagaagagcacctattggtagataaaaaaattaaaaaagaaagcagacattgaatgttcctgagtggactACTTACAGTTTTCaattaaattggcttgaaaatcgatggaaagacttgaaaatggctgtctagcaatgatcaataggctgtcattgtaggccgtcattgtaaataaaaatgtgatcttaattgacttgcctagttaaataaaggttaaataaaataaataaagtcaACAACCAACATGATCGAGTTTGAAGAAATAaacaaataataatgtgcaaatattgtacaatccaagtgTCCAAAacttttagagacttacccaggaagactcacagctgtaatcgctgccaaaggggttTCCaacgtattgactcaggggtgtgaatacgtatTTAAATGAGATACACAACAAATGTAtatggacacccattcaaatgagtggattcggctatttcagccacacccgttgctgacaggtgaataaaatcgacaaacattggcagtagaatggtccgtactgaagagctcagtgactttcaacgtggtaccatcataggatgccacttttccaataagtcagttcgtcaaatttcggccctgctagagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU715525 True 1087 lncRNA 0.39 2 58959423 58960761
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528090 LOC106583075 coding downstream 63625 58890001 ~ 58895798 (-)
LOC110528983 LOC106565665 coding downstream 91207 58846467 ~ 58868216 (-)
LOC118965303 LOC106565665 coding downstream 114055 58843679 ~ 58845368 (-)
sfrs3 sfrs3 coding downstream 245793 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 coding downstream 263567 58691817 ~ 58695856 (-)
eps8l3a LOC106583072 coding upstream 61933 59022694 ~ 59037726 (-)
LOC110528098 LOC106583071 coding upstream 82510 59043271 ~ 59047897 (-)
LOC110528100 mep50 coding upstream 124341 59085102 ~ 59094461 (-)
LOC110527129 LOC106583068 coding upstream 138514 59099275 ~ 59105032 (-)
LOC110528101 LOC106583060 coding upstream 155687 59116448 ~ 59128446 (-)
G629197 NA non-coding downstream 17259 58941944 ~ 58942164 (-)
G629193 NA non-coding downstream 20320 58938815 ~ 58939103 (-)
G629190 NA non-coding downstream 23913 58935118 ~ 58935510 (-)
G629187 gnai3 non-coding downstream 26987 58925958 ~ 58932436 (-)
G629185 NA non-coding downstream 34788 58924350 ~ 58924635 (-)
G629307 NA non-coding upstream 51821 59012582 ~ 59014673 (-)
G629313 NA non-coding upstream 88816 59049577 ~ 59049803 (-)
G629742 NA non-coding upstream 97932 59058693 ~ 59079816 (-)
G629777 NA non-coding upstream 144341 59105102 ~ 59105380 (-)
LOC110528069 LOC106583062 other downstream 530052 58425680 ~ 58437154 (-)
G628714 NA other downstream 841301 58117190 ~ 58118122 (-)
G628575 LOC106579815 other downstream 1086092 57872050 ~ 57873331 (-)
G630132 NA other upstream 786689 59747450 ~ 59752591 (-)
G630227 NA other upstream 955218 59915979 ~ 59917551 (-)
G630747 NA other upstream 1122285 60083046 ~ 60083857 (-)
LOC110528989 LOC106583145 other upstream 1777734 60699279 ~ 60822525 (-)
G631740 NA other upstream 2229947 61190708 ~ 61191045 (-)

Expression

G629264 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.75.
End of interactive chart.

G629264 Expression in each Bioproject

Bar chart with 17 bars.
G629264 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network