XLOC_025471 (fthl27)


Basic Information

Item Value
gene id XLOC_025471
gene name fthl27
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 32139666 ~ 32140446 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050218
ATGGAGACTTCTCAGATTCGCCAGAACTACGCCCGCGACAGCGAGGCTGCGATCAACAAGATGATCAATCTGGAGCTTTACGCTGGATACACCTACACCTCCATGGCTCACTACTTCAAACGGGACGATGTGGCTCTTCCTGGATTTGCCAAGTTCTTCAAGAAGAACAGTGAGGAGGAGCGCGAACATGCTGAGAAATTCATGGAGTTCCAGAACAAGAGAGGTGGACGCATTGTCCTTCAGGACATCAAGGTGCTTCTcctgtcatttattatttaa

Function

symbol description
fthl27 Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm. Is expressed in several structures, including Kupffer's vesicle; hypochord; mucus secreting cell; segmental plate; and sensory system.

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006880 intracellular sequestering of iron ion biological_process
GO:0006826 iron ion transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0008198 ferrous iron binding molecular_function
GO:0008199 ferric iron binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-72 Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm. Is expressed in several structures, including Kupffer's vesicle; hypochord; mucus secreting cell; segmental plate; and sensory system.

Ensembl:

ensembl_id ENSDARG00000116586

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050218 True 279 mRNA 0.48 2 32139666 32140446

Neighbor

gene id symbol gene type direction distance location
XLOC_025470 BX511021.1 coding upstream 3438 32135037 ~ 32136228 (+)
XLOC_025469 fthl31 coding upstream 9211 32129632 ~ 32130455 (+)
XLOC_025468 fthl29 coding upstream 12083 32125452 ~ 32127583 (+)
XLOC_025467 fthl31 coding upstream 19312 32118670 ~ 32120354 (+)
XLOC_025466 fthl30 coding upstream 26018 32112004 ~ 32113648 (+)
XLOC_025472 syt5a coding downstream 1936 32142382 ~ 32151167 (+)
XLOC_025473 NA coding downstream 153327 32293773 ~ 32297003 (+)
XLOC_025474 prl coding downstream 201471 32341917 ~ 32345900 (+)
XLOC_025475 NA coding downstream 205688 32346134 ~ 32347493 (+)
XLOC_025476 ap2a1 coding downstream 225365 32365811 ~ 32401481 (+)
XLOC_025429 BX649540.1 misc upstream 1890630 30248739 ~ 30249036 (+)
XLOC_025458 NA non-coding upstream 220535 31918162 ~ 31919131 (+)
XLOC_025455 BX324157.1 non-coding upstream 351029 31788521 ~ 31788637 (+)
XLOC_025449 NA non-coding upstream 900103 31231809 ~ 31239563 (+)
XLOC_025447 NA non-coding upstream 968792 31169219 ~ 31170874 (+)
XLOC_025446 NA non-coding upstream 1034013 31097933 ~ 31105653 (+)
XLOC_025481 CR936975.1 non-coding downstream 334215 32474661 ~ 32477285 (+)
XLOC_025487 FP236454.1 non-coding downstream 430863 32571309 ~ 32571371 (+)
XLOC_025492 NA non-coding downstream 511251 32651697 ~ 32658436 (+)

Expression


Co-expression Network