G629319


Basic Information

Item Value
gene id G629319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59054581 ~ 59055253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715592
gactgggccgcagggcagtattccaacatgatgacgaccccaaacacacctccaagacgaccactgccttgctaaagaagctgagggtaaaggtgatggactggccaagcatgtctccagacctaaaccctattgagcatctgtggggcatcctcaaacggaaggtggaggagtgcaaggtctctaacatccaccagctccgtgatgtcgtcatggaggagtggaagaggactccagtggcaacctgtgaagctctggtgaactccatgcccaagagggttaaggcagtgctggaaaatgatggtggccacacaaaatattgacacttcgggcccaatttggacattttcacttaggggtgtactcacatttgttgccagcggtttagacattaacggctgtgtgttgagttattttgtggggacagcaaatttacactgttatacaagctgtacactcactactttacattgtagcaaagtgtcatttcttcagtgttgtcagatGAAAAGGTATACTCAAATAtgtacaaaaatgtgaggggtgtactcacttttgtgatagactgtatatatatacagtaccagtcaaaagtttggacacacctactcattcaagggtttttctttatttttactattttctacattttagaataattcaagaattgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU715592 True 673 lncRNA 0.44 1 59054581 59055253

Neighbor

gene id symbol gene type direction distance location
LOC110528097 LOC106583070 coding upstream 11723 59035073 ~ 59042858 (+)
LOC110528095 LOC106565671 coding upstream 31722 58969726 ~ 59022859 (+)
LOC110528093 gnai3 coding upstream 122140 58925940 ~ 58932441 (+)
LOC110528092 LOC106583074 coding upstream 133751 58915182 ~ 58920830 (+)
LOC110528091 LOC106583076 coding upstream 164870 58878933 ~ 58889711 (+)
LOC110528099 LOC106583069 coding downstream 13384 59068637 ~ 59084729 (+)
LOC110528104 LOC106565516 coding downstream 214409 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 243789 59299042 ~ 59317047 (+)
LOC110528107 endou coding downstream 276740 59331993 ~ 59338641 (+)
LOC110528108 LOC106583237 coding downstream 289370 59344623 ~ 59349054 (+)
G629314 NA non-coding upstream 4061 59050301 ~ 59050520 (+)
G629201 NA non-coding upstream 101803 58948450 ~ 58952778 (+)
G629200 NA non-coding upstream 106644 58947719 ~ 58947937 (+)
G629199 NA non-coding upstream 106898 58947286 ~ 58947683 (+)
G629179 NA non-coding upstream 110364 58943795 ~ 58944217 (+)
G629355 NA non-coding downstream 49150 59104403 ~ 59104626 (+)
G629356 NA non-coding downstream 50143 59105396 ~ 59105630 (+)
G629359 NA non-coding downstream 55581 59110834 ~ 59111043 (+)
G629364 NA non-coding downstream 61247 59116500 ~ 59117096 (+)
G629365 LOC106583060 non-coding downstream 64704 59119957 ~ 59121000 (+)
G628468 LOC106583084 other upstream 340997 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 550504 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 1062709 57917801 ~ 58055214 (+)
G627035 NA other upstream 1458530 57542882 ~ 57596051 (+)
G629678 NA other downstream 629078 59684331 ~ 59684763 (+)
G629679 NA other downstream 629619 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 650700 59705922 ~ 59712261 (+)
G630206 NA other downstream 858287 59913345 ~ 59917551 (+)

Expression


Co-expression Network