G629355



Basic Information


Item Value
gene id G629355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59104403 ~ 59104626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU715630
GTTGGTTTGTTAACTACAGTGGTTGACTACTGCCACCAAGTTGTTGTTTTATCAGATATAGCCTGTTCCAGTTTGCAGAATGCATACAGGTATTTGAATATAAGCTAGCGCGTGAAAAAGGGAATCCGAACagagtgcttctacacctgcattgcttgctgtttgggggtttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggct

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU715630 True 224 lncRNA 0.44 1 59104403 59104626

Neighbor


gene id symbol gene type direction distance location
LOC110528099 LOC106583069 coding upstream 19704 59068637 ~ 59084729 (+)
LOC110528097 LOC106583070 coding upstream 61545 59035073 ~ 59042858 (+)
LOC110528095 LOC106565671 coding upstream 81544 58969726 ~ 59022859 (+)
LOC110528093 gnai3 coding upstream 171962 58925940 ~ 58932441 (+)
LOC110528092 LOC106583074 coding upstream 183573 58915182 ~ 58920830 (+)
LOC110528104 LOC106565516 coding downstream 165036 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 194416 59299042 ~ 59317047 (+)
LOC110528107 endou coding downstream 227367 59331993 ~ 59338641 (+)
LOC110528108 LOC106583237 coding downstream 239997 59344623 ~ 59349054 (+)
LOC110528109 LOC106583234 coding downstream 284136 59388762 ~ 59435880 (+)
G629319 NA non-coding upstream 49150 59054581 ~ 59055253 (+)
G629314 NA non-coding upstream 53883 59050301 ~ 59050520 (+)
G629201 NA non-coding upstream 151625 58948450 ~ 58952778 (+)
G629200 NA non-coding upstream 156466 58947719 ~ 58947937 (+)
G629199 NA non-coding upstream 156720 58947286 ~ 58947683 (+)
G629356 NA non-coding downstream 770 59105396 ~ 59105630 (+)
G629359 NA non-coding downstream 6208 59110834 ~ 59111043 (+)
G629364 NA non-coding downstream 11874 59116500 ~ 59117096 (+)
G629365 LOC106583060 non-coding downstream 15331 59119957 ~ 59121000 (+)
G629366 LOC106583060 non-coding downstream 18682 59123308 ~ 59123552 (+)
G628468 LOC106583084 other upstream 390819 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 600326 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 1112531 57917801 ~ 58055214 (+)
G629678 NA other downstream 579705 59684331 ~ 59684763 (+)
G629679 NA other downstream 580246 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 601327 59705922 ~ 59712261 (+)
G630206 NA other downstream 808914 59913345 ~ 59917551 (+)
mustn1a NA other downstream 1002445 60107071 ~ 60109290 (+)

Expression



Co-expression Network