G629392


Basic Information

Item Value
gene id G629392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59160168 ~ 59160395 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715668
gttctgtctagtgcagaaagacacaaaacagaaaaacaactacccacaacacacaggtgggaaaaggctacctaagtatggttctcaatcagagacaacgatagacagctccctctgattgagaaccacacccggccaaacacacagaaatagaaaacatagaacccacaacatagaatgcccaccccaactcacgccctgaccaaaccaaaatagagacataaaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU715668 True 228 lncRNA 0.45 1 59160168 59160395

Neighbor

gene id symbol gene type direction distance location
LOC110528099 LOC106583069 coding upstream 75469 59068637 ~ 59084729 (+)
LOC110528097 LOC106583070 coding upstream 117310 59035073 ~ 59042858 (+)
LOC110528095 LOC106565671 coding upstream 137309 58969726 ~ 59022859 (+)
LOC110528093 gnai3 coding upstream 227727 58925940 ~ 58932441 (+)
LOC110528092 LOC106583074 coding upstream 239338 58915182 ~ 58920830 (+)
LOC110528104 LOC106565516 coding downstream 109267 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 138647 59299042 ~ 59317047 (+)
LOC110528107 endou coding downstream 171598 59331993 ~ 59338641 (+)
LOC110528108 LOC106583237 coding downstream 184228 59344623 ~ 59349054 (+)
LOC110528109 LOC106583234 coding downstream 228367 59388762 ~ 59435880 (+)
G629371 NA non-coding upstream 31814 59128063 ~ 59128354 (+)
G629367 NA non-coding upstream 35816 59124056 ~ 59124352 (+)
G629366 LOC106583060 non-coding upstream 36616 59123308 ~ 59123552 (+)
G629365 LOC106583060 non-coding upstream 39168 59119957 ~ 59121000 (+)
G629364 NA non-coding upstream 43072 59116500 ~ 59117096 (+)
G629457 NA non-coding downstream 100201 59260596 ~ 59260905 (+)
G629458 NA non-coding downstream 102001 59262396 ~ 59262758 (+)
G629463 NA non-coding downstream 107235 59267630 ~ 59267859 (+)
G629468 NA non-coding downstream 108085 59268480 ~ 59268742 (+)
G628468 LOC106583084 other upstream 446584 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 656091 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 1168296 57917801 ~ 58055214 (+)
G629678 NA other downstream 523936 59684331 ~ 59684763 (+)
G629679 NA other downstream 524477 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 545558 59705922 ~ 59712261 (+)
G630206 NA other downstream 753145 59913345 ~ 59917551 (+)
mustn1a NA other downstream 946676 60107071 ~ 60109290 (+)

Expression


Co-expression Network