G629510


Basic Information

Item Value
gene id G629510
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59355103 ~ 59355421 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU715792
gcagagggagcacccccttatccacatcgacgggacagtagtggagagtgtagtaagttttaagttcctcggcatacacatcaaggacaaactgaattggtccacccacacagacagcgttgtgaagaaggcgcagcaacgcctcttaacctcaggaggctgaagaaatttggcttgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctgtcgggctgcatcaccgcctggtacggcaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU715792 True 319 lncRNA 0.53 1 59355103 59355421

Neighbor

gene id symbol gene type direction distance location
LOC110528108 LOC106583237 coding upstream 6049 59344623 ~ 59349054 (+)
LOC110528107 endou coding upstream 16462 59331993 ~ 59338641 (+)
LOC110528105 LOC106583239 coding upstream 38056 59299042 ~ 59317047 (+)
LOC110528104 LOC106565516 coding upstream 61280 59269662 ~ 59293823 (+)
LOC110528099 LOC106583069 coding upstream 270404 59068637 ~ 59084729 (+)
LOC110528109 LOC106583234 coding downstream 33341 59388762 ~ 59435880 (+)
gpr84 gpr84 coding downstream 81834 59437255 ~ 59443170 (+)
b4galnt1b b4gn1 coding downstream 170738 59526159 ~ 59545751 (+)
LOC110527130 NA coding downstream 190028 59545449 ~ 59553878 (+)
LOC110528984 LOC106565607 coding downstream 259030 59614451 ~ 59620821 (+)
G629493 NA non-coding upstream 28072 59326733 ~ 59327031 (+)
G629465 myl6 non-coding upstream 31083 59317845 ~ 59324020 (+)
G629485 NA non-coding upstream 60491 59294410 ~ 59294612 (+)
G629514 NA non-coding downstream 12206 59367627 ~ 59367852 (+)
G629520 NA non-coding downstream 21383 59376804 ~ 59377036 (+)
G629527 NA non-coding downstream 28333 59383754 ~ 59383953 (+)
G629534 NA non-coding downstream 39609 59395030 ~ 59395231 (+)
G629539 NA non-coding downstream 51512 59406933 ~ 59407165 (+)
LOC110528095 LOC106565671 other upstream 332256 58969726 ~ 59022859 (+)
G628468 LOC106583084 other upstream 641519 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 851026 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 1363231 57917801 ~ 58055214 (+)
G629678 NA other downstream 328910 59684331 ~ 59684763 (+)
G629679 NA other downstream 329451 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 350532 59705922 ~ 59712261 (+)
G630206 NA other downstream 558119 59913345 ~ 59917551 (+)
mustn1a NA other downstream 751650 60107071 ~ 60109290 (+)

Expression


Co-expression Network