G630044


Basic Information

Item Value
gene id G630044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59713595 ~ 59714525 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716378
GCTAATTGGCTGAAATGAACCTACACAAAGGACTGGAGTTGAGGAACACTTGTGAATAACTCGACGGTGAGCCTCTGCTGATGTTTCAAGATATTcattatgtctttgtttatagACTAAGAAGAGACCGAACTGTGGTCGTGCCAAGAAGGGCTGTGGGCATGTGCAGGGACAAGGCCATAAAAAAAAGTTTGTCATCAGGAACATTGTTGAGGCTGCTGCCGTAGATATCTCAGAGGCTAGCGTGTTTGAATGTGAGTAGATTGTTGAATGGTCTGAGGGCAACTAGTCATGTGATGCTAGCATTGAATGGCACTGGAGCATGTATTTTGTTTGATTAGATCCACTAGATCCTTGGTTTATTACACTTCATACTCAAACATCCTTTCTTCTGGCAAGCCTGTTTTGCCCAAGCTCTATGTGAAACTGCACTACTGCGTGAGCTGTGCCATCCACTGTAAGGTGGTCAGGAACCACTCCACAGAGACCAGGAAGGACCGCACACCACCATCCCACTTCAGGCCCAGTTGTGAATACTCAAGCACCAAGCTCTGCCATGGCCATTAAATGGTGATCATGAATGTCGAACTGAGTATGTGCTAGTTTTCTTTATTTCCTTTCAATTTGTCCAATTAAGACCTACACAACCAGGTGAGGGAGAGTTCCCAAATAATCAATGACCGTAATggatcaatcaagtacaagggaggagcgaaaacccatggaatgagtttgacacctgtggcCTGCACAAATCCTCATGTCTGGGATATCTGCTTGGATTGAGAGAATCCTCAGTCAAATACAGAAACTGACATTTCCATTCTTGCTTTTCCTCTAACGATGGCTGTTATTCCATGATGTGATTGTGGAATACTGTTCTGATGGAATGTGTTCTCTTTCTACAGGGTGGCCCACCCAGAGTTCTTCC

Function

NR:

description
40S ribosomal protein S26

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU716378 True 931 lncRNA 0.45 1 59713595 59714525

Neighbor

gene id symbol gene type direction distance location
LOC110528120 lmbr1l coding downstream 19474 59672674 ~ 59694121 (-)
LOC110528119 rhebl1 coding downstream 42028 59667401 ~ 59671567 (-)
LOC110528118 prkag1 coding downstream 49381 59656971 ~ 59664214 (-)
LOC110528116 LOC106583226 coding downstream 113970 59556060 ~ 59599625 (-)
LOC110528115 NA coding downstream 172084 59539797 ~ 59541511 (-)
LOC110528124 LOC106565535 coding upstream 11887 59726412 ~ 59729413 (-)
LOC110528128 LOC106583146 coding upstream 175913 59890438 ~ 59895213 (-)
ruvbl1 ruvb1 coding upstream 395349 60109874 ~ 60122317 (-)
LOC110528140 LOC106583208 coding upstream 568119 60282644 ~ 60295290 (-)
LOC110528141 LOC106583207 coding upstream 616504 60331029 ~ 60336416 (-)
G630042 LOC106583221 non-coding downstream 236 59709104 ~ 59713359 (-)
G630109 NA non-coding downstream 10505 59702786 ~ 59703090 (-)
G630101 NA non-coding downstream 20084 59693306 ~ 59693511 (-)
G630096 NA non-coding downstream 30804 59682532 ~ 59682791 (-)
G630094 NA non-coding downstream 32442 59680925 ~ 59681153 (-)
G630114 NA non-coding upstream 2337 59716862 ~ 59717153 (-)
G630108 LOC106583219 non-coding upstream 79041 59793566 ~ 59797694 (-)
G630107 LOC108425565 non-coding upstream 85551 59800076 ~ 59801992 (-)
G630245 NA non-coding upstream 174348 59888873 ~ 59889181 (-)
G630695 NA non-coding upstream 275163 59989688 ~ 59989977 (-)
sfrs3 sfrs3 other downstream 1000021 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 1017828 58691817 ~ 58695856 (-)
LOC110528069 LOC106583062 other downstream 1284224 58425680 ~ 58437154 (-)
G628714 NA other downstream 1595473 58117190 ~ 58118122 (-)
G628575 LOC106579815 other downstream 1840264 57872050 ~ 57873331 (-)
G630132 NA other upstream 32925 59747450 ~ 59752591 (-)
G630227 NA other upstream 201454 59915979 ~ 59917551 (-)
G630747 NA other upstream 368521 60083046 ~ 60083857 (-)
LOC110528989 LOC106583145 other upstream 1023970 60699279 ~ 60822525 (-)
G631740 NA other upstream 1476183 61190708 ~ 61191045 (-)

Expression


Co-expression Network