Gene
RNA
| Item | Value |
|---|---|
| gene id | G630108 |
| gene name | LOC106583219 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 59793566 ~ 59797694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Proliferation-associated protein 2G4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU716446 | False | 615 | lncRNA | 0.49 | 3 | 59793566 | 59797694 |
| TU716447 | True | 552 | lncRNA | 0.49 | 2 | 59793566 | 59797213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528124 | LOC106565535 | coding | downstream | 64153 | 59726412 ~ 59729413 (-) |
| LOC110528120 | lmbr1l | coding | downstream | 99445 | 59672674 ~ 59694121 (-) |
| LOC110528119 | rhebl1 | coding | downstream | 121999 | 59667401 ~ 59671567 (-) |
| LOC110528118 | prkag1 | coding | downstream | 129352 | 59656971 ~ 59664214 (-) |
| LOC110528116 | LOC106583226 | coding | downstream | 193941 | 59556060 ~ 59599625 (-) |
| LOC110528128 | LOC106583146 | coding | upstream | 92744 | 59890438 ~ 59895213 (-) |
| ruvbl1 | ruvb1 | coding | upstream | 312180 | 60109874 ~ 60122317 (-) |
| LOC110528140 | LOC106583208 | coding | upstream | 484950 | 60282644 ~ 60295290 (-) |
| LOC110528141 | LOC106583207 | coding | upstream | 533335 | 60331029 ~ 60336416 (-) |
| LOC110528144 | LOC106583201 | coding | upstream | 598270 | 60395964 ~ 60458245 (-) |
| G630114 | NA | non-coding | downstream | 76413 | 59716862 ~ 59717153 (-) |
| G630044 | NA | non-coding | downstream | 79041 | 59713595 ~ 59714525 (-) |
| G630042 | LOC106583221 | non-coding | downstream | 80207 | 59709104 ~ 59713359 (-) |
| G630109 | NA | non-coding | downstream | 90476 | 59702786 ~ 59703090 (-) |
| G630101 | NA | non-coding | downstream | 100055 | 59693306 ~ 59693511 (-) |
| G630107 | LOC108425565 | non-coding | upstream | 2382 | 59800076 ~ 59801992 (-) |
| G630245 | NA | non-coding | upstream | 91179 | 59888873 ~ 59889181 (-) |
| G630695 | NA | non-coding | upstream | 191994 | 59989688 ~ 59989977 (-) |
| G630705 | LOC106583215 | non-coding | upstream | 202817 | 60000511 ~ 60001246 (-) |
| G630706 | NA | non-coding | upstream | 204473 | 60002167 ~ 60002600 (-) |
| G630132 | NA | other | downstream | 40975 | 59747450 ~ 59752591 (-) |
| sfrs3 | sfrs3 | other | downstream | 1079992 | 58707572 ~ 58713630 (-) |
| LOC110528083 | LOC106583085 | other | downstream | 1097799 | 58691817 ~ 58695856 (-) |
| LOC110528069 | LOC106583062 | other | downstream | 1364195 | 58425680 ~ 58437154 (-) |
| G628714 | NA | other | downstream | 1675444 | 58117190 ~ 58118122 (-) |
| G630227 | NA | other | upstream | 118285 | 59915979 ~ 59917551 (-) |
| G630747 | NA | other | upstream | 285352 | 60083046 ~ 60083857 (-) |
| LOC110528989 | LOC106583145 | other | upstream | 940801 | 60699279 ~ 60822525 (-) |
| G631740 | NA | other | upstream | 1393014 | 61190708 ~ 61191045 (-) |
| G631687 | emc3 | other | upstream | 1400313 | 61198007 ~ 61199438 (-) |
