G630279


Basic Information

Item Value
gene id G630279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59948859 ~ 59949079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716643
GTTTAAAGCTAATCCTGAGATTACACTTGACCAATGTTGGCCTTAGCGTTTACCCGGTGACCTGAACTACAGGGGACAGACATGGACCTGAAGACATTTCAGTGCTACACGGCTGAGGCTCCGGACCTCTTGGAGCAGATAGCTCAGCTCCTCCAGGAATGTCAGGAGAAGGAGATCCTGCTTCCCAAGGGAATCCGGAACCTGTGTGCCTTGTCCTGGGA

Function

NR:

description
PREDICTED: uncharacterized protein C3orf20-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU716643 True 221 lncRNA 0.52 1 59948859 59949079

Neighbor

gene id symbol gene type direction distance location
LOC110528132 NA coding upstream 2277 59937320 ~ 59946582 (+)
LOC110528131 ccdc174 coding upstream 14366 59930706 ~ 59934493 (+)
LOC118965358 NA coding upstream 112143 59832723 ~ 59838376 (+)
LOC110528985 crbn coding upstream 128560 59804846 ~ 59820299 (+)
LOC118965306 NA coding upstream 144249 59802962 ~ 59804612 (+)
LOC110528133 LOC106583215 coding downstream 45009 59994088 ~ 60037994 (+)
LOC110528134 LOC106583214 coding downstream 96848 60045927 ~ 60075151 (+)
rft1 rft1 coding downstream 126385 60075464 ~ 60101858 (+)
LOC110528987 LOC106583211 coding downstream 135447 60084526 ~ 60102511 (+)
mustn1a NA coding downstream 158212 60107071 ~ 60109290 (+)
G630269 NA non-coding upstream 18856 59929749 ~ 59930003 (+)
G630262 NA non-coding upstream 23274 59925347 ~ 59925585 (+)
G630206 NA non-coding upstream 31308 59913345 ~ 59917551 (+)
G630205 NA non-coding upstream 58565 59889993 ~ 59890294 (+)
G630198 NA non-coding upstream 67553 59881058 ~ 59881306 (+)
G630280 LOC106583155 non-coding downstream 187 59949266 ~ 59950250 (+)
G630340 NA non-coding downstream 55018 60004097 ~ 60004553 (+)
G630342 NA non-coding downstream 57324 60006403 ~ 60006611 (+)
G630348 NA non-coding downstream 68565 60017644 ~ 60017919 (+)
G630375 NA non-coding downstream 141117 60090196 ~ 60142632 (+)
LOC110528122 LOC106583221 other upstream 240806 59705922 ~ 59712261 (+)
G629679 NA other upstream 263672 59684872 ~ 59685187 (+)
G629678 NA other upstream 264096 59684331 ~ 59684763 (+)
LOC110528099 LOC106583069 other upstream 864130 59068637 ~ 59084729 (+)
G630327 NA other downstream 198738 60147817 ~ 60148381 (+)
G630516 NA other downstream 519852 60468931 ~ 60483057 (+)
G630515 uroc1 other downstream 543198 60492277 ~ 60496429 (+)
G631568 gpx1 other downstream 1286399 61235478 ~ 61251702 (+)

Expression


Co-expression Network