G630280 (LOC106583155)


Basic Information

Item Value
gene id G630280
gene name LOC106583155
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59949266 ~ 59950250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716644
CTTCAGCACCTTGAAGTTCAAGAAAAAGTTCCCTGTTGACCGGGACAACAACAGTGATAAACAAATACcgaCCTGTATTCCTGTGACGTCCACTCTGAGGCTTTGCCTGGAGGAGTGTCTgtcccatctctccttctctctcacgtACAAAGAGGTAAACAATGCCCCCTGTACTCCACGTCTTCACAGCAGGActctggaggtgtgttactgggCTGTCAACAAGCTCAGACCCATTCTGGATCAGATAAAAGAGGAGAATGCCCGGCTGGATCTGAGAGGCCACACACGCCCCATGGTGGCTCAACACTACCAGGAC

Function

NR:

description
PREDICTED: uncharacterized protein C3orf20-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU716644 True 319 lncRNA 0.51 4 59949266 59950250

Neighbor

gene id symbol gene type direction distance location
LOC110528132 NA coding upstream 2684 59937320 ~ 59946582 (+)
LOC110528131 ccdc174 coding upstream 14773 59930706 ~ 59934493 (+)
LOC118965358 NA coding upstream 112550 59832723 ~ 59838376 (+)
LOC110528985 crbn coding upstream 128967 59804846 ~ 59820299 (+)
LOC118965306 NA coding upstream 144656 59802962 ~ 59804612 (+)
LOC110528133 LOC106583215 coding downstream 43838 59994088 ~ 60037994 (+)
LOC110528134 LOC106583214 coding downstream 95677 60045927 ~ 60075151 (+)
rft1 rft1 coding downstream 125214 60075464 ~ 60101858 (+)
LOC110528987 LOC106583211 coding downstream 134276 60084526 ~ 60102511 (+)
mustn1a NA coding downstream 157041 60107071 ~ 60109290 (+)
G630279 NA non-coding upstream 187 59948859 ~ 59949079 (+)
G630269 NA non-coding upstream 19263 59929749 ~ 59930003 (+)
G630262 NA non-coding upstream 23681 59925347 ~ 59925585 (+)
G630206 NA non-coding upstream 31715 59913345 ~ 59917551 (+)
G630205 NA non-coding upstream 58972 59889993 ~ 59890294 (+)
G630340 NA non-coding downstream 53847 60004097 ~ 60004553 (+)
G630342 NA non-coding downstream 56153 60006403 ~ 60006611 (+)
G630348 NA non-coding downstream 67394 60017644 ~ 60017919 (+)
G630375 NA non-coding downstream 139946 60090196 ~ 60142632 (+)
G630326 NA non-coding downstream 165378 60115628 ~ 60116293 (+)
LOC110528122 LOC106583221 other upstream 241213 59705922 ~ 59712261 (+)
G629679 NA other upstream 264079 59684872 ~ 59685187 (+)
G629678 NA other upstream 264503 59684331 ~ 59684763 (+)
LOC110528099 LOC106583069 other upstream 864537 59068637 ~ 59084729 (+)
G630327 NA other downstream 197567 60147817 ~ 60148381 (+)
G630516 NA other downstream 518681 60468931 ~ 60483057 (+)
G630515 uroc1 other downstream 542027 60492277 ~ 60496429 (+)
G631568 gpx1 other downstream 1285228 61235478 ~ 61251702 (+)

Expression


Co-expression Network