G630718


Basic Information

Item Value
gene id G630718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60062964 ~ 60064931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU717119
tagttgggaaaacatgtttttatgaaGAACATGtggtctttatgacagaatgttaaaattattgAATTTCTTTACCAAATGATACTACCCAAAAGGCATTCTATTGGTGGAATGACCcatatacactcacacacacacgcacatgcatgtagacacacacatacacagtgtaGTATTCTGGGGGAACCTCACAACAGTATGCCAAATTGTGAAGAGGCAACTCAGTAAGTATTGGGTTTTACTGTGTTAAGTGTTTTTAGGGTGTGGCCCAGTGTCTCTGTGCCACTGCGTTAAGATGCTTAGGGTCAGTTATTGGATACAGGTTTATTGTTATGTGATAGTGGAACTCATTTGAAACTCAACAGTTCACCAAACTACCCTGGGAAACATATTACATAACCAGGAAACCAAACCCACAAGACTTTCCATTCTGCACTGCCAGCTTgtgtgctgcacacacacacacacgcgcgcacacacaaacacacaattagTTAATGATTAATAGAGTGAGAGCAGAGAGGTGAACATTCTGAGACGGTCCTTGGGGAGCGTGGGTGAGGACAATAGGAGCAGATGCCAATGCTGGATCAGGTATAGCTGGCAACAGTGTAGAAGTGAATGTCTCCTGTCATCTCACCTGTCCTGAGCATAGAGGGGATAGAGGTACCTAATGACTGAAAAACTTTAACACCACATCCCATTTCAGATCCACACTCAGAAGGGCTCAACAGCCATGCGACTCTGTACCTTCTCTGTGGTTGACCTCACTCAAACTATCTGAATATAGTCTTTCTCTTGTGGGACTCCTGCAAAAACAAATACAgtcacactgacagagagagacacacacattccTTTGCATGGTGAACAGCTACCCATGAACGGTGACCAACCCAAAATCCACCAATGCATAATTTCCCTGTATGTAGCAGGGAAACCCCATAACCCcataacacacagctacagtcTCACACTGTGTAAACACCGTCTTTGCTTTATAGCTGTCTGGTTTCCATCAAAGTATTGGTGGTGAGTGTCTGTATGTCTCTATGAGTGAGTAATAGTGACATTAGGGGtgtgtgtttatctctgtctgtgtgactggggAAACTCACGTTGCTCTGTAGAGGTCAAAGCGTCCCTTCTCCTGAATATGGAACATCAGGTCTCCTCCATTCAGATATTCCATGACAAAGAACAGGTGTTCCTTGGACTGGAAGGTGGAGTAGAGGTGTGTGAGGAAGGGGTTGTCCCAGGCCAGGGCCAGGACTCTCTTCTCCACCATGGTACACTCCACATCATCATCCATCAGAACCACGTCTTTCTTCAGGGCCTTCACCGCAAACCACTCCCCCTGACCTTTCAACTCTGCCAGCAGgacCTTGCCAAAGCTGCCCTTGCCTAGGACCTTGTGAAAGACAAAGTTGTCTACGTTGATGAGTGTCAGGTGGGTGAGGCGAGATGGGGGATGCGGGCTGGAGCCCTTCCACAGCCTGCCATAAGGGTGGCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU717119 True 1514 lncRNA 0.46 3 60062964 60064931
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528128 LOC106583146 coding downstream 167751 59890438 ~ 59895213 (-)
LOC110528124 LOC106565535 coding downstream 333551 59726412 ~ 59729413 (-)
LOC110528120 lmbr1l coding downstream 368843 59672674 ~ 59694121 (-)
LOC110528119 rhebl1 coding downstream 391397 59667401 ~ 59671567 (-)
LOC110528118 prkag1 coding downstream 398750 59656971 ~ 59664214 (-)
ruvbl1 ruvb1 coding upstream 44943 60109874 ~ 60122317 (-)
LOC110528140 LOC106583208 coding upstream 217713 60282644 ~ 60295290 (-)
LOC110528141 LOC106583207 coding upstream 266098 60331029 ~ 60336416 (-)
LOC110528144 LOC106583201 coding upstream 331033 60395964 ~ 60458245 (-)
si:dkey-197j19.6 LOC106583152 coding upstream 393579 60458510 ~ 60471468 (-)
G630713 NA non-coding downstream 49471 60013247 ~ 60013493 (-)
G630712 NA non-coding downstream 52585 60010071 ~ 60010379 (-)
G630708 NA non-coding downstream 58992 60003768 ~ 60003972 (-)
G630706 NA non-coding downstream 60364 60002167 ~ 60002600 (-)
G630705 LOC106583215 non-coding downstream 61718 60000511 ~ 60001246 (-)
G630748 NA non-coding upstream 37017 60101948 ~ 60106137 (-)
G630774 NA non-coding upstream 82019 60146950 ~ 60147298 (-)
G630775 NA non-coding upstream 82559 60147490 ~ 60147700 (-)
G630776 NA non-coding upstream 85084 60150015 ~ 60150330 (-)
G630788 NA non-coding upstream 111647 60176578 ~ 60239327 (-)
G630227 NA other downstream 145413 59915979 ~ 59917551 (-)
G630132 NA other downstream 310373 59747450 ~ 59752591 (-)
sfrs3 sfrs3 other downstream 1349390 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 1367197 58691817 ~ 58695856 (-)
LOC110528069 LOC106583062 other downstream 1633593 58425680 ~ 58437154 (-)
G630747 NA other upstream 18115 60083046 ~ 60083857 (-)
LOC110528989 LOC106583145 other upstream 673564 60699279 ~ 60822525 (-)
G631740 NA other upstream 1125777 61190708 ~ 61191045 (-)
G631687 emc3 other upstream 1133076 61198007 ~ 61199438 (-)
G632459 NA other upstream 1626317 61691248 ~ 61691644 (-)

Expression

G630718 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G630718 Expression in each Bioproject

Bar chart with 16 bars.
G630718 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network