G630326


Basic Information

Item Value
gene id G630326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60115628 ~ 60116293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716695
CCTGTGATCTCGGTCTTCTTGGGCTTCATCAGCTGTCCCATCATAGACAGGATATCTTGACCTCCCTGAGAGGACAGGAACCTCACTTTAACAACCAAAGATCAAGTGTGTCTTTGTTTGTGCATAATTCTTTTTCAATCAACAGTTATTTTCTAAGTGTATATCTGCAGTGCAGTCTCATATTCACTTGAATCAGGGTCTAggggagactgtgtgtgtgtgtacctgtggtctaGCATTGGCAATATCCAGGTCGTGTAGCGTGACGTCTTGGATAATCTCTTTCTTCTTGTGGACGTCCCCCTTAGGCAGCGGCACGTACTCCTCAGCCTCCAGGTCAAACTCTGTGGCAAATGTGTCACACCGACCTTGTCTCTGTGCACACCCCATACACATGGAAGGAATGGTTCAACACAGAACACAGGCATTAAATATTAACCCAATCCCATTCAGAGGTGGTCAGGTGGCTGAAACTAGGCCAATCCCATTCAGAGGTGGTCAGGTGACTGAAACTAGGCCAATCCCATTCAGAGGTGGTCAGGTGACTGAAACTAGGCCAATCCCATCAGAGGCGGTCAGGTGACTGAAACTGGGCCAATCTCATCAGAGGTGGTCAGGTGGCTGAAAC

Function

NR:

description
PREDICTED: ruvB-like 1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU716695 True 628 lncRNA 0.48 2 60115628 60116293

Neighbor

gene id symbol gene type direction distance location
mustn1a NA coding upstream 6338 60107071 ~ 60109290 (+)
LOC110528987 LOC106583211 coding upstream 13117 60084526 ~ 60102511 (+)
rft1 rft1 coding upstream 13770 60075464 ~ 60101858 (+)
LOC110528134 LOC106583214 coding upstream 40477 60045927 ~ 60075151 (+)
LOC110528133 LOC106583215 coding upstream 77634 59994088 ~ 60037994 (+)
eefsec LOC106583209 coding downstream 4134 60120427 ~ 60144066 (+)
LOC110528142 LOC106583206 coding downstream 222506 60338799 ~ 60355957 (+)
arpc4 LOC103358720 coding downstream 264390 60380683 ~ 60391541 (+)
LOC118965307 NA coding downstream 447300 60563593 ~ 60565240 (+)
LOC110528988 LOC106583198 coding downstream 515319 60631612 ~ 60635398 (+)
G630348 NA non-coding upstream 97709 60017644 ~ 60017919 (+)
G630342 NA non-coding upstream 109017 60006403 ~ 60006611 (+)
G630340 NA non-coding upstream 111075 60004097 ~ 60004553 (+)
G630280 LOC106583155 non-coding upstream 165378 59949266 ~ 59950250 (+)
G630279 NA non-coding upstream 166549 59948859 ~ 59949079 (+)
G630385 NA non-coding downstream 20295 60136588 ~ 60137007 (+)
G630453 LOC106583208 non-coding downstream 172416 60288709 ~ 60293376 (+)
G630500 NA non-coding downstream 253638 60369931 ~ 60370320 (+)
G630501 NA non-coding downstream 255251 60371544 ~ 60421878 (+)
G630513 NA non-coding downstream 273291 60389584 ~ 60578290 (+)
G630206 NA other upstream 198077 59913345 ~ 59917551 (+)
LOC110528122 LOC106583221 other upstream 407575 59705922 ~ 59712261 (+)
G629679 NA other upstream 430441 59684872 ~ 59685187 (+)
G629678 NA other upstream 430865 59684331 ~ 59684763 (+)
G630327 NA other downstream 31524 60147817 ~ 60148381 (+)
G630516 NA other downstream 352638 60468931 ~ 60483057 (+)
G630515 uroc1 other downstream 375984 60492277 ~ 60496429 (+)
G631568 gpx1 other downstream 1119185 61235478 ~ 61251702 (+)
LOC110528160 LOC106583186 other downstream 1269739 61385568 ~ 61470736 (+)

Expression


Co-expression Network