G630385


Basic Information

Item Value
gene id G630385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60136588 ~ 60137007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716755
gccacacctcccatgctcttgttgtagtcctttacagcagctggaatggggacatttttggtggtccatgccccagtagcgcccttcacacgcctgacgacgtgatctccactgaaggacttgtggattGTTGTGCACATCACCACCTCTCTGGTATCCATCCACTTCACAAAGAGCAGGCCATCTTCACGGATCCATCTcatgtagaggtcgaccgattatgatttttcaacgccgataccgattattggaggaccaaaaaagccgataccgattaatcggccgattttataaaaaaaaacataatatttgtaataatgacaattacaacaatactgaattaacaccttattttaacgtaatataaaacatcaataaaatcaatttagc

Function

NR:

description
piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU716755 True 390 lncRNA 0.42 2 60136588 60137007

Neighbor

gene id symbol gene type direction distance location
mustn1a NA coding upstream 27298 60107071 ~ 60109290 (+)
LOC110528987 LOC106583211 coding upstream 34077 60084526 ~ 60102511 (+)
rft1 rft1 coding upstream 34730 60075464 ~ 60101858 (+)
LOC110528134 LOC106583214 coding upstream 61437 60045927 ~ 60075151 (+)
LOC110528133 LOC106583215 coding upstream 98594 59994088 ~ 60037994 (+)
LOC110528142 LOC106583206 coding downstream 201792 60338799 ~ 60355957 (+)
arpc4 LOC103358720 coding downstream 243676 60380683 ~ 60391541 (+)
LOC118965307 NA coding downstream 426586 60563593 ~ 60565240 (+)
LOC110528988 LOC106583198 coding downstream 494605 60631612 ~ 60635398 (+)
pob pob coding downstream 1059711 61196718 ~ 61200460 (+)
G630326 NA non-coding upstream 20295 60115628 ~ 60116293 (+)
G630348 NA non-coding upstream 118669 60017644 ~ 60017919 (+)
G630342 NA non-coding upstream 129977 60006403 ~ 60006611 (+)
G630340 NA non-coding upstream 132035 60004097 ~ 60004553 (+)
G630280 LOC106583155 non-coding upstream 186338 59949266 ~ 59950250 (+)
G630453 LOC106583208 non-coding downstream 151702 60288709 ~ 60293376 (+)
G630500 NA non-coding downstream 232924 60369931 ~ 60370320 (+)
G630501 NA non-coding downstream 234537 60371544 ~ 60421878 (+)
G630513 NA non-coding downstream 252577 60389584 ~ 60578290 (+)
G630523 NA non-coding downstream 258983 60395990 ~ 60397394 (+)
G630206 NA other upstream 219037 59913345 ~ 59917551 (+)
LOC110528122 LOC106583221 other upstream 428535 59705922 ~ 59712261 (+)
G629679 NA other upstream 451401 59684872 ~ 59685187 (+)
G629678 NA other upstream 451825 59684331 ~ 59684763 (+)
G630327 NA other downstream 10810 60147817 ~ 60148381 (+)
G630516 NA other downstream 331924 60468931 ~ 60483057 (+)
G630515 uroc1 other downstream 355270 60492277 ~ 60496429 (+)
G631568 gpx1 other downstream 1098471 61235478 ~ 61251702 (+)
LOC110528160 LOC106583186 other downstream 1249025 61385568 ~ 61470736 (+)

Expression


Co-expression Network