Gene
RNA
| Item | Value |
|---|---|
| gene id | G630453 |
| gene name | LOC106583208 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 60288709 ~ 60293376 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: GATA-binding factor 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU716833 | True | 746 | lncRNA | 0.61 | 2 | 60288709 | 60293376 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eefsec | LOC106583209 | coding | upstream | 144643 | 60120427 ~ 60144066 (+) |
| mustn1a | NA | coding | upstream | 179419 | 60107071 ~ 60109290 (+) |
| LOC110528987 | LOC106583211 | coding | upstream | 186198 | 60084526 ~ 60102511 (+) |
| rft1 | rft1 | coding | upstream | 186851 | 60075464 ~ 60101858 (+) |
| LOC110528134 | LOC106583214 | coding | upstream | 213558 | 60045927 ~ 60075151 (+) |
| LOC110528142 | LOC106583206 | coding | downstream | 45423 | 60338799 ~ 60355957 (+) |
| arpc4 | LOC103358720 | coding | downstream | 87307 | 60380683 ~ 60391541 (+) |
| LOC118965307 | NA | coding | downstream | 270217 | 60563593 ~ 60565240 (+) |
| LOC110528988 | LOC106583198 | coding | downstream | 338236 | 60631612 ~ 60635398 (+) |
| pob | pob | coding | downstream | 903342 | 61196718 ~ 61200460 (+) |
| G630375 | NA | non-coding | upstream | 146077 | 60090196 ~ 60142632 (+) |
| G630385 | NA | non-coding | upstream | 151702 | 60136588 ~ 60137007 (+) |
| G630326 | NA | non-coding | upstream | 172416 | 60115628 ~ 60116293 (+) |
| G630348 | NA | non-coding | upstream | 270790 | 60017644 ~ 60017919 (+) |
| G630342 | NA | non-coding | upstream | 282098 | 60006403 ~ 60006611 (+) |
| G630500 | NA | non-coding | downstream | 76555 | 60369931 ~ 60370320 (+) |
| G630501 | NA | non-coding | downstream | 78168 | 60371544 ~ 60421878 (+) |
| G630513 | NA | non-coding | downstream | 96208 | 60389584 ~ 60578290 (+) |
| G630523 | NA | non-coding | downstream | 102614 | 60395990 ~ 60397394 (+) |
| G630528 | LOC106583201 | non-coding | downstream | 119163 | 60412539 ~ 60414116 (+) |
| G630327 | NA | other | upstream | 140328 | 60147817 ~ 60148381 (+) |
| G630206 | NA | other | upstream | 371158 | 59913345 ~ 59917551 (+) |
| LOC110528122 | LOC106583221 | other | upstream | 580656 | 59705922 ~ 59712261 (+) |
| G629679 | NA | other | upstream | 603522 | 59684872 ~ 59685187 (+) |
| G630516 | NA | other | downstream | 175555 | 60468931 ~ 60483057 (+) |
| G630515 | uroc1 | other | downstream | 198901 | 60492277 ~ 60496429 (+) |
| G631568 | gpx1 | other | downstream | 942102 | 61235478 ~ 61251702 (+) |
| LOC110528160 | LOC106583186 | other | downstream | 1092656 | 61385568 ~ 61470736 (+) |
| G632146 | NA | other | downstream | 1397905 | 61691281 ~ 61691647 (+) |
