G630500


Basic Information

Item Value
gene id G630500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60369931 ~ 60370320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716881
gtGTTTATTCTACTGTGTTTTAATCAATGCCACTCCTACATTGCTCTATCTAATATttatctaatatttatatatttatgtatacttttagatttgtgtgtattgttgtgaaatgttAGATATGCCATGCAACCAAGGACTgtctccgtaagaagcatctcaaggtcctggagtggcctagccagtctccagacctgaacccaatagaaaatctttggagggagctgaaagtccgtattgcccagcgacagccccgaaacctgaaggatctggagaaggtctgtatggaggagtgggccaaaatccctgcagcagtgtgtgcaaacctggtcaagaactacaggaaacgtatgatctctgtaattgtaaacaaaggtttctgtaccaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU716881 True 390 lncRNA 0.42 1 60369931 60370320

Neighbor

gene id symbol gene type direction distance location
LOC110528142 LOC106583206 coding upstream 13974 60338799 ~ 60355957 (+)
eefsec LOC106583209 coding upstream 225865 60120427 ~ 60144066 (+)
mustn1a NA coding upstream 260641 60107071 ~ 60109290 (+)
LOC110528987 LOC106583211 coding upstream 267420 60084526 ~ 60102511 (+)
rft1 rft1 coding upstream 268073 60075464 ~ 60101858 (+)
arpc4 LOC103358720 coding downstream 10363 60380683 ~ 60391541 (+)
LOC118965307 NA coding downstream 193273 60563593 ~ 60565240 (+)
LOC110528988 LOC106583198 coding downstream 261292 60631612 ~ 60635398 (+)
pob pob coding downstream 826398 61196718 ~ 61200460 (+)
LOC110528158 LOC106583188 coding downstream 830567 61200887 ~ 61233404 (+)
G630453 LOC106583208 non-coding upstream 76555 60288709 ~ 60293376 (+)
G630375 NA non-coding upstream 227299 60090196 ~ 60142632 (+)
G630385 NA non-coding upstream 232924 60136588 ~ 60137007 (+)
G630326 NA non-coding upstream 253638 60115628 ~ 60116293 (+)
G630348 NA non-coding upstream 352012 60017644 ~ 60017919 (+)
G630501 NA non-coding downstream 1224 60371544 ~ 60421878 (+)
G630513 NA non-coding downstream 19264 60389584 ~ 60578290 (+)
G630523 NA non-coding downstream 25670 60395990 ~ 60397394 (+)
G630528 LOC106583201 non-coding downstream 42219 60412539 ~ 60414116 (+)
G630539 NA non-coding downstream 65767 60436087 ~ 60446429 (+)
G630327 NA other upstream 221550 60147817 ~ 60148381 (+)
G630206 NA other upstream 452380 59913345 ~ 59917551 (+)
LOC110528122 LOC106583221 other upstream 661878 59705922 ~ 59712261 (+)
G629679 NA other upstream 684744 59684872 ~ 59685187 (+)
G630516 NA other downstream 98611 60468931 ~ 60483057 (+)
G630515 uroc1 other downstream 121957 60492277 ~ 60496429 (+)
G631568 gpx1 other downstream 865158 61235478 ~ 61251702 (+)
LOC110528160 LOC106583186 other downstream 1015712 61385568 ~ 61470736 (+)
G632146 NA other downstream 1320961 61691281 ~ 61691647 (+)

Expression


Co-expression Network