G630902


Basic Information

Item Value
gene id G630902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60488050 ~ 60575476 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU717315
ttacataagtattcagaccctgtattcagaccctttactcagtactttgttgaagcaactttggcagtggttacagccttgagtcttcttggatatgacgcttcaagctttgcacacctgtttttgggaagtttctcccattcttctctgcattcctctcaagctctgtcaggttggatggggagcatcgctgcacagtgattttcaggtctctccagagatgttcgatatgggtcaaatccgggctctggctgggacactcaaggacattgagagacttgtcccgaagccacacctgcgttgtcttggctgtgtacttagggtcgttgtcatgttggaaggtgaaccttcaccctagtctgaggtcctgagcactctggagcaagttttcatcaaggatctctctgttcttttctccgttcaactttccctccatcctgactagtctcccagtccctgctgctgaaaaacatcccacagcatgatgctgccaccaccagcagggatggtgtcaggtttcttcCCGATgtcacgcttggcattcaggccaaatagttaaatcttggtttcatcagaccagagaatcttgtttctcatggtctgagagtcctttagatgccttttggcaaactccaagcgggcagtcatgtgccttttactgaggagtggcttccgtcaggccactctaccataaaggcctgattgttgtcctactggaaggttctcctatctgcacagaggaactctgcatctacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU717315 True 879 lncRNA 0.48 2 60488050 60575476
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528145 LOC105017320 coding downstream 109 60478688 ~ 60487941 (-)
si:dkey-197j19.6 LOC106583152 coding downstream 16582 60458510 ~ 60471468 (-)
LOC110528144 LOC106583201 coding downstream 29805 60395964 ~ 60458245 (-)
LOC110528141 LOC106583207 coding downstream 151634 60331029 ~ 60336416 (-)
LOC110528140 LOC106583208 coding downstream 192760 60282644 ~ 60295290 (-)
trnaf-gaa-79 NA coding upstream 51753 60627229 ~ 60627301 (-)
LOC110528152 LOC106583196 coding upstream 64389 60639865 ~ 60669084 (-)
LOC110528989 LOC106583145 coding upstream 123803 60699279 ~ 60822525 (-)
LOC110528153 LOC106583194 coding upstream 354825 60930301 ~ 60933747 (-)
LOC110528154 gnai2 coding upstream 370588 60946064 ~ 61041619 (-)
G630886 NA non-coding downstream 117598 60370161 ~ 60370452 (-)
G630788 NA non-coding downstream 248723 60176578 ~ 60239327 (-)
G630794 NA non-coding downstream 296213 60191327 ~ 60191837 (-)
G630776 NA non-coding downstream 337720 60150015 ~ 60150330 (-)
G630775 NA non-coding downstream 340350 60147490 ~ 60147700 (-)
G631214 NA non-coding upstream 253910 60829386 ~ 60829648 (-)
G631238 NA non-coding upstream 271524 60847000 ~ 60847202 (-)
G631253 NA non-coding upstream 279955 60855431 ~ 60855779 (-)
G631321 NA non-coding upstream 310323 60885799 ~ 60888175 (-)
G630747 NA other downstream 404193 60083046 ~ 60083857 (-)
G630227 NA other downstream 570499 59915979 ~ 59917551 (-)
G630132 NA other downstream 735459 59747450 ~ 59752591 (-)
sfrs3 sfrs3 other downstream 1774476 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 1792283 58691817 ~ 58695856 (-)
G631740 NA other upstream 615232 61190708 ~ 61191045 (-)
G631687 emc3 other upstream 622531 61198007 ~ 61199438 (-)
G632459 NA other upstream 1115772 61691248 ~ 61691644 (-)
G632994 LOC106583176 other upstream 1645796 62221272 ~ 62222445 (-)

Expression

G630902 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

G630902 Expression in each Bioproject

Bar chart with 15 bars.
G630902 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8000.
End of interactive chart.

Co-expression Network