G630515 (uroc1)


Basic Information

Item Value
gene id G630515
gene name uroc1
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60492277 ~ 60496429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU716905
GTAAGTAAGACTTACCGAAACTCTCCTATCAGCAATAGCTTGATTGATGGCCAAGGCAATACACACACGGCCTTTCTGGTCTGAGTAGAGGATTCTGGCTTGGGAGCCCACCacctacacacagagaacatTCAGAAATGGCATTGGCAGTTGTATAATACATTTCTTATTTATCTAGTATCAGGATGTTAATGATTAACATTGTGTCTTATATGTGTCCTATTAATGAATACCATCCTGTGTTTTCCGGCCTCACGGATCCAGCGGATGTTGTCGTTGTACTGCTGTCGCACACGCTCAGTCACATTGGCGCTGATCTCCTCCAGGACAGTGGCGGCGATGTCATCAGTCAGTGTCAGGTCATGAGGGTCACCGGAGGTGCAGACCCAGCGGAATGGTCCAAAGCCCAGGGAGAAGATGTCACTGCAGAGTGGTCAAGGGTTAGGGCCAAGAGTTTGACCTgatcatgtgacctgaccagaaaACTCACCCTGTCACTCACCCCATGATGTCTTGGACATAGGATGGGTAGCGGAACTCTGTCGCTccgcctccctccttctctacctccgctcctgaagaaagagagatgaacACAAACCTAGATGTTATCAAACTGGAGAGGACTGCGGACATCACTAGACATGCTGTGTTCAGTCTATTCTTCAGCATGTGTATCGGAACCTTCAAGTTACCCCTTAGCATTAGCCACATATCTTGGATCACATTACCTTACTCCCAATGCTAATATTAACCATGAGGGGGGTGATATAATATCTGACCCTGTGTCAGTGAATCAGTATGGTGGTGGTTTAACTGTAGGACTCACCTGCTCTCTGGGCCTCCAGGAGGAAGGCGTTTCCATAGTCCCAGAAGAACATCCCTGCCTCAGACAGCTTGTTGATGGCAGCTACCTGTCTACAAAGgctgggagagaggaagggaagaccACCACAGGTTAGAGAACAACCCCTCAACCTTAACCACAAACAGATCAGgggtctccaactcaatcatggtAATTCTTGATGAATAGTTGATTTGCTGAATCAGTTGTTTGATGTGTGACTGGGATGGAACCATAGATGGCAAACCCAGTAGCTCTGCAGGACCAGAGTTGGAGGAGACCCCTGAATTAGACCAACTGCCTTCAAAAAAGGTACAGCATCAAGGTCTAACCTCTCATGGACCACGGTTTTGAAGCGTGCTGGGTCTGTGGCCATGAGCTGGTTGGCCTGTTGGAGGCTGAGCTGAGCTGGGTAGTACCCTCCACTGAAGGGGTTGTGGAGGGAGGTCTGGTCTGAGCCCAGGTCCACCAGCagctctcctgtcctctcataCTCCGTCAACAGACGCTCCCTGGCAGAGAAGGAAACAAGGGATCCCAAAGGGGCACCTCATCTACCTAAACAGGATCCATGCAAAACACAATCACATATCACATTAACACACATCCCAAAGCTCTCCATCATACAAAAACGGAACAGACATCGCTACCATCACATAGGTAGATTAACAGCAGGGCGGGTGTTATTGGCCAATAACAAAGTAAACACACTGGCCTCGGCAATGACCCCCACACAGCCAGCGATGACAGCAGCCTTGGCCTGTGCCCCGCTCATGCCCCCCAGCCCCGATGTCACCAACACCCGGCCCCTCAGGTCATCAGACCCCAGATACCTCCGCCCTGCATTCAACACTGTCAgctaaaggagggagagagagagacgggaaggagaggaaagagagacagacacaatgTTAAGACAACGTCAATGTAACCAGCTCCTGGGGAAACTGGAGAGCAGAGCATGGGGAGATGATAAAGCAGCCATTGATAGCGTGACTTAGGTGGATTAATACATTGTTTTAGTTCAATTAAATAAAGTGAgctgttgtgtacagtatgtgagagTGGTGGTTACCTGGGCAACTGCATGGTCCAGGTTGTTCATGATCATGAGCATGATGGAGGCAGCTTGGCGTGTACGACAGGGGTACTGATCTATAGGGTAGGCCCTGAGGACACACGCACGCCcgtgcagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaagggtgtGGTAGACCATATCATGGCATCAACAGATAAAGAGGAATACtacagatggagagatgagaggtggtGTTAGGTGATTATACTGTACATACCTCATATGTATGCGGGGACAGAAGCGGTACATGTAGATGTGTCCATACTGCCTGAGCTCCTGGGCGAATTCAGCAGCCAGGATGTTGTGGTGGGAGGGGGGAAAGTAGCGCAGGGCATTCCTCAGGGCTAGCTAGAGAGGGGGAGTAGATTAGGGGGTGAGATAGGAGTTCAGATGGGGTGGCCCTCTTCTTCTTTTGCATCCTTTTTTCCACTAACTTTCTGGTCATTTGTGTttcactccccctctctatccatgAAAGCACTCACTCTTATCTCTCTTAATCATTGACAGTGCCCTTTGCTCCCAGTCCTGGCAAACATTAGCGAAGATGATAGAAGGTTCTGAGGAGATGAACCAACACTGTCTCCTACCCTTAAGCCAAAACATTCCACTGTGCTGAGTATGTGAACCGTGCTTTATTGATCCCAATAGATTTAATAAAATTATTCACATGC

Function

symbol description
uroc1 Predicted to enable urocanate hydratase activity. Predicted to be involved in histidine catabolic process. Predicted to act upstream of or within histidine metabolic process. Human ortholog(s) of this gene implicated in urocanase deficiency. Orthologous to human UROC1 (urocanate hydratase 1).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU716905 True 2706 TUCP 0.49 3 60492277 60496429

Neighbor

gene id symbol gene type direction distance location
arpc4 LOC103358720 coding upstream 100736 60380683 ~ 60391541 (+)
LOC110528142 LOC106583206 coding upstream 136320 60338799 ~ 60355957 (+)
eefsec LOC106583209 coding upstream 348211 60120427 ~ 60144066 (+)
mustn1a NA coding upstream 382987 60107071 ~ 60109290 (+)
LOC110528987 LOC106583211 coding upstream 389766 60084526 ~ 60102511 (+)
LOC118965307 NA coding downstream 67164 60563593 ~ 60565240 (+)
LOC110528988 LOC106583198 coding downstream 135183 60631612 ~ 60635398 (+)
pob pob coding downstream 700289 61196718 ~ 61200460 (+)
LOC110528158 LOC106583188 coding downstream 704458 61200887 ~ 61233404 (+)
LOC118965359 fancd2 coding downstream 749493 61245922 ~ 61248219 (+)
G630539 NA non-coding upstream 45848 60436087 ~ 60446429 (+)
G630501 NA non-coding upstream 70399 60371544 ~ 60421878 (+)
G630528 LOC106583201 non-coding upstream 78161 60412539 ~ 60414116 (+)
G630523 NA non-coding upstream 94883 60395990 ~ 60397394 (+)
G630500 NA non-coding upstream 121957 60369931 ~ 60370320 (+)
G630557 pius non-coding downstream 3702 60500131 ~ 60555496 (+)
G631050 NA non-coding downstream 202062 60698491 ~ 60698704 (+)
G631075 LOC106583145 non-coding downstream 240007 60736436 ~ 60736797 (+)
G631209 NA non-coding downstream 329727 60826156 ~ 60826363 (+)
G631216 NA non-coding downstream 335052 60831481 ~ 60831719 (+)
G630516 NA other upstream 9220 60468931 ~ 60483057 (+)
G630327 NA other upstream 343896 60147817 ~ 60148381 (+)
G630206 NA other upstream 574726 59913345 ~ 59917551 (+)
LOC110528122 LOC106583221 other upstream 784224 59705922 ~ 59712261 (+)
G631568 gpx1 other downstream 739049 61235478 ~ 61251702 (+)
LOC110528160 LOC106583186 other downstream 889603 61385568 ~ 61470736 (+)
G632146 NA other downstream 1194852 61691281 ~ 61691647 (+)
G632776 NA other downstream 1643087 62139516 ~ 62139991 (+)
G632809 LOC100194703 other downstream 1734086 62230515 ~ 62231349 (+)

Expression


Co-expression Network