G631075 (LOC106583145)


Basic Information

Item Value
gene id G631075
gene name LOC106583145
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60736436 ~ 60736797 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU717497
cctttctctcctctatcccccttATCTCCAGGTCGTCCAGCCTCTCCCAGTTCTCCGGCTCTCCCTGGTACTCCAGGTATTCCAGGTTTTCCTGGCTCCCCAGCCTGTCCCGGGGGCCCCACTGGGCCCTTCTCTCCGATGGCCCTCCCTATGGGTCCTGTGGCCCCTACAGgcccctgttccccctgctctcccttcacacctctctccccagccagccCGCGAGCACC

Function

NR:

description
collagen alpha-1(VII) chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU717497 True 230 lncRNA 0.65 2 60736436 60736797

Neighbor

gene id symbol gene type direction distance location
LOC110528988 LOC106583198 coding upstream 101038 60631612 ~ 60635398 (+)
LOC118965307 NA coding upstream 171196 60563593 ~ 60565240 (+)
arpc4 LOC103358720 coding upstream 344895 60380683 ~ 60391541 (+)
LOC110528142 LOC106583206 coding upstream 380479 60338799 ~ 60355957 (+)
eefsec LOC106583209 coding upstream 592370 60120427 ~ 60144066 (+)
pob pob coding downstream 459921 61196718 ~ 61200460 (+)
LOC110528158 LOC106583188 coding downstream 464090 61200887 ~ 61233404 (+)
LOC118965359 fancd2 coding downstream 509125 61245922 ~ 61248219 (+)
LOC118965308 NA coding downstream 513296 61250093 ~ 61255427 (+)
LOC110528159 LOC106583187 coding downstream 519115 61255912 ~ 61376237 (+)
G631050 NA non-coding upstream 37732 60698491 ~ 60698704 (+)
G630513 NA non-coding upstream 158146 60389584 ~ 60578290 (+)
G630557 pius non-coding upstream 180940 60500131 ~ 60555496 (+)
G630539 NA non-coding upstream 290007 60436087 ~ 60446429 (+)
G630501 NA non-coding upstream 314558 60371544 ~ 60421878 (+)
G631209 NA non-coding downstream 89359 60826156 ~ 60826363 (+)
G631216 NA non-coding downstream 94684 60831481 ~ 60831719 (+)
G631219 NA non-coding downstream 97301 60834098 ~ 60834621 (+)
G631252 NA non-coding downstream 118974 60855771 ~ 60855995 (+)
G631256 NA non-coding downstream 119931 60856728 ~ 60857034 (+)
G630515 uroc1 other upstream 240007 60492277 ~ 60496429 (+)
G630516 NA other upstream 253379 60468931 ~ 60483057 (+)
G630327 NA other upstream 588055 60147817 ~ 60148381 (+)
mustn1a NA other upstream 627146 60107071 ~ 60109290 (+)
G630206 NA other upstream 818885 59913345 ~ 59917551 (+)
G631568 gpx1 other downstream 498681 61235478 ~ 61251702 (+)
LOC110528160 LOC106583186 other downstream 649235 61385568 ~ 61470736 (+)
G632146 NA other downstream 954484 61691281 ~ 61691647 (+)
G632776 NA other downstream 1402719 62139516 ~ 62139991 (+)
G632809 LOC100194703 other downstream 1493718 62230515 ~ 62231349 (+)

Expression


Co-expression Network