G631687 (emc3)


Basic Information

Item Value
gene id G631687
gene name emc3
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61198007 ~ 61199438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU718160
TCTGCAGGCATGGCCATGGCAGCACCACTCATCTGCTCCTGCATGATCCTGGACTGGTCTGCACCATTATCTTGTCCTAGAATTAAGGAGTACATGCTTCGCAGCCCAAACACATTCAGGAAATACCACGACGCTGAGCTCACCCAGGATGCATCAAGTGAGAGTAGCTCGATTCCTTGTTGCAACATGGGCTTGAAGCGCAGGGTGAGAGGAAATGGAACCTTGGTTGTGACAAACCCTGAGAAGGTCCAGTTAATCCAGCCTCCGATGAGGATCATGGGAAGAACATTGGTCACATTGCCTTTCATCATGTCTGTCAGCATGCTGGGGTCTGGACAAAGAAACAGTTAGCGTAGCTTTACAGAGTACAATCGCAAACAAACTGAGTTGTAAATGGTGCGCTATTAGAAATAATATGCTCCATATCATGTGGCAGGGTTTAATTGTGATACACGGCCCAATACCTGCCTATCATGGTATGAGAATAGGATTATATGAGAAGGAATGATGTGATTCTCTTATGCTCACCTGTCATTGGGGAGGGAGGAACAAcctttcttttggtatttttgAAGAATCCATCTTCTTGATTATTGAAGTAAAACTTCCTC

Function

symbol description
emc3 Predicted to contribute to membrane insertase activity. Acts upstream of or within photoreceptor cell maintenance and retina development in camera-type eye. Located in Golgi apparatus and trans-Golgi network transport vesicle. Is expressed in several structures, including brain; digestive system; eye; immature eye; and yolk syncytial layer. Orthologous to human EMC3 (ER membrane protein complex subunit 3).

NR:

description
PREDICTED: ER membrane protein complex subunit 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU718160 True 611 TUCP 0.45 4 61198007 61199438

Neighbor

gene id symbol gene type direction distance location
LOC110528157 brk1 coding downstream 11157 61181265 ~ 61186850 (-)
LOC110528156 NA coding downstream 33342 61158940 ~ 61164665 (-)
LOC118965385 NA coding downstream 39146 61156718 ~ 61158861 (-)
LOC110528155 LOC106583192 coding downstream 69490 61055389 ~ 61128517 (-)
LOC110528154 gnai2 coding downstream 156388 60946064 ~ 61041619 (-)
gpx1 gpx1 coding upstream 36041 61218553 ~ 61237064 (-)
LOC110528164 LOC106583182 coding upstream 342565 61542003 ~ 61557188 (-)
LOC110528165 LOC106583181 coding upstream 434759 61634197 ~ 61749981 (-)
LOC110528991 LOC106583180 coding upstream 601240 61800678 ~ 61921139 (-)
LOC110528169 LOC106583177 coding upstream 960537 62159975 ~ 62175491 (-)
G631732 NA non-coding downstream 21920 61175822 ~ 61176087 (-)
G631731 LOC106581475 non-coding downstream 22668 61175088 ~ 61175339 (-)
G631730 NA non-coding downstream 23005 61174521 ~ 61175002 (-)
G631727 NA non-coding downstream 25957 61171829 ~ 61172050 (-)
G631685 NA non-coding upstream 144 61199582 ~ 61200452 (-)
G631743 LOC106583188 non-coding upstream 24143 61223581 ~ 61224806 (-)
G631863 NA non-coding upstream 175282 61374720 ~ 61378603 (-)
G631864 NA non-coding upstream 179650 61379088 ~ 61379392 (-)
G631740 NA other downstream 6962 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 449908 60699279 ~ 60822525 (-)
G630747 NA other downstream 1114150 60083046 ~ 60083857 (-)
G630227 NA other downstream 1280456 59915979 ~ 59917551 (-)
G630132 NA other downstream 1445416 59747450 ~ 59752591 (-)
G632459 NA other upstream 491810 61691248 ~ 61691644 (-)
G632994 LOC106583176 other upstream 1021834 62221272 ~ 62222445 (-)
LOC118965309 LOC106583169 other upstream 1308781 62506239 ~ 62520518 (-)
si:dkey-28n18.9 LOC106583160 other upstream 1807337 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 2586334 63785772 ~ 63827547 (-)

Expression


Co-expression Network