G632476


Basic Information

Item Value
gene id G632476
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61717364 ~ 61717841 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU718994
gaaaaattgggcgtgcaaagttattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagttgcttggggtatgcctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactcca
>TU718992
gaaaaattgggcgtgcaaagttattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagttgcttggggtatgcctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctgg
>TU718993
tatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaagttattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagttgcttggggtatgcctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU718994 False 382 lncRNA 0.42 1 61717364 61717745
TU718992 False 273 lncRNA 0.44 1 61717473 61717745
TU718993 True 369 lncRNA 0.40 1 61717473 61717841

Neighbor

gene id symbol gene type direction distance location
LOC110528164 LOC106583182 coding downstream 160176 61542003 ~ 61557188 (-)
gpx1 gpx1 coding downstream 480369 61218553 ~ 61237064 (-)
LOC110528157 brk1 coding downstream 530514 61181265 ~ 61186850 (-)
LOC110528156 NA coding downstream 552699 61158940 ~ 61164665 (-)
LOC118965385 NA coding downstream 558503 61156718 ~ 61158861 (-)
LOC110528991 LOC106583180 coding upstream 82837 61800678 ~ 61921139 (-)
LOC110528169 LOC106583177 coding upstream 442134 62159975 ~ 62175491 (-)
LOC110528170 LOC106565587 coding upstream 458140 62175981 ~ 62185946 (-)
LOC110527134 LOC106583149 coding upstream 627241 62345082 ~ 62347315 (-)
LOC110528993 NA coding upstream 631261 62349102 ~ 62349904 (-)
G632475 NA non-coding downstream 481 61716541 ~ 61716883 (-)
G632460 NA non-coding downstream 24219 61692816 ~ 61693145 (-)
G632453 NA non-coding downstream 55341 61661819 ~ 61662023 (-)
G632450 NA non-coding downstream 58678 61658424 ~ 61658686 (-)
G632427 NA non-coding downstream 83801 61632680 ~ 61633563 (-)
G632483 NA non-coding upstream 25469 61743310 ~ 61758965 (-)
G632544 NA non-coding upstream 128761 61846602 ~ 61847677 (-)
G632638 NA non-coding upstream 259885 61977726 ~ 61979080 (-)
G632683 NA non-coding upstream 297501 62015342 ~ 62015725 (-)
G632459 NA other downstream 25720 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 517926 61198007 ~ 61199438 (-)
G631740 NA other downstream 526319 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 969265 60699279 ~ 60822525 (-)
G630747 NA other downstream 1633507 60083046 ~ 60083857 (-)
G632994 LOC106583176 other upstream 503431 62221272 ~ 62222445 (-)
LOC118965309 LOC106583169 other upstream 790378 62506239 ~ 62520518 (-)
si:dkey-28n18.9 LOC106583160 other upstream 1288934 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 2067931 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 2276675 63993536 ~ 64036771 (-)

Expression


Co-expression Network