Gene
RNA
| Item | Value |
|---|---|
| gene id | G632933 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 62137519 ~ 62137858 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable ATP-dependent RNA helicase ddx42 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU719491 | True | 340 | lncRNA | 0.47 | 1 | 62137519 | 62137858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528991 | LOC106583180 | coding | downstream | 216380 | 61800678 ~ 61921139 (-) |
| LOC110528165 | LOC106583181 | coding | downstream | 387538 | 61634197 ~ 61749981 (-) |
| LOC110528164 | LOC106583182 | coding | downstream | 580331 | 61542003 ~ 61557188 (-) |
| gpx1 | gpx1 | coding | downstream | 900524 | 61218553 ~ 61237064 (-) |
| LOC110528157 | brk1 | coding | downstream | 950669 | 61181265 ~ 61186850 (-) |
| LOC110528169 | LOC106583177 | coding | upstream | 22117 | 62159975 ~ 62175491 (-) |
| LOC110528170 | LOC106565587 | coding | upstream | 38123 | 62175981 ~ 62185946 (-) |
| LOC110527134 | LOC106583149 | coding | upstream | 207224 | 62345082 ~ 62347315 (-) |
| LOC110528993 | NA | coding | upstream | 211244 | 62349102 ~ 62349904 (-) |
| LOC118965309 | LOC106583169 | coding | upstream | 368381 | 62506239 ~ 62520518 (-) |
| G632683 | NA | non-coding | downstream | 121794 | 62015342 ~ 62015725 (-) |
| G632638 | NA | non-coding | downstream | 158439 | 61977726 ~ 61979080 (-) |
| G632544 | NA | non-coding | downstream | 289842 | 61846602 ~ 61847677 (-) |
| G632483 | NA | non-coding | downstream | 378554 | 61743310 ~ 61758965 (-) |
| G632936 | NA | non-coding | upstream | 3094 | 62140952 ~ 62166943 (-) |
| G632960 | NA | non-coding | upstream | 39063 | 62176921 ~ 62177177 (-) |
| G632961 | NA | non-coding | upstream | 40410 | 62178268 ~ 62178574 (-) |
| G632963 | NA | non-coding | upstream | 44242 | 62182100 ~ 62182299 (-) |
| G632991 | NA | non-coding | upstream | 79923 | 62217781 ~ 62218003 (-) |
| G632459 | NA | other | downstream | 445875 | 61691248 ~ 61691644 (-) |
| G631687 | emc3 | other | downstream | 938081 | 61198007 ~ 61199438 (-) |
| G631740 | NA | other | downstream | 946474 | 61190708 ~ 61191045 (-) |
| LOC110528989 | LOC106583145 | other | downstream | 1389420 | 60699279 ~ 60822525 (-) |
| G630747 | NA | other | downstream | 2053662 | 60083046 ~ 60083857 (-) |
| G632994 | LOC106583176 | other | upstream | 83414 | 62221272 ~ 62222445 (-) |
| si:dkey-28n18.9 | LOC106583160 | other | upstream | 868917 | 62983119 ~ 63008072 (-) |
| LOC110528212 | LOC106583293 | other | upstream | 1647914 | 63785772 ~ 63827547 (-) |
| LOC110528216 | LOC106565449 | other | upstream | 1856658 | 63993536 ~ 64036771 (-) |
