G632936


Basic Information

Item Value
gene id G632936
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62140952 ~ 62166943 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU719494
CAGGAGAAACGACAGGTCGCAGTACATTTCAATGACCTGAATCatgatatttctaactttttttttttagatttgtgGCATAGAAAGTTAAGATTTCAGACTGGGGAGGTGATATCAATAATACTCTGAGTAGAAGGGAATGTTTggggattttcaccctccagacattatttcctaaaggaCTGAATGATGAAATGCCTTTGTATGgtatgttgtgaatttgaacatgaattAACTGCCTATTTAAGATTTCTGTTTTTCGTATGATGTACCCAATGACTAATGTaaagttccgacaatgcagtaataaccaacaagtaatctaacctaacaattccacaactactaccttatacacacaagtgtaaagggatgaagaataacTACATAgttatatgaatgagtgatggtacagaacggcatagacaagatgcagtagatggtatagagtacagtatatacatatgagatgagtaatgtagggtatgtaaacattaagtggcattgtttaaagtggctagtgatacattttttacatgtatggcacagccactcaatgtttggccttcctgtgacatcgggtggtgtaggtgtcctggagggcagggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgagggcggtgcagttgccataccaggcggtgatacagcccgccaggatgctctcgattgtgcatctgtagaagtttgtgagtgcttttggtgacaagccgaatttcttcagcctcctgaggttgaagaggcgctgctgcgccttcttcacgatgctgtctgtgtgagtggaccaattcagtttgtctgtggtgtgtatgccgaggaacttaaaacttgctaccctctccactactgttccatcgatgtggataggggggtgttccctctgctgtttcctgaagtccacaatcatctccttagttttgttgacgttgagtgtgaggttattttcctgacaccacactccgagggccctcacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU719494 True 1015 lncRNA 0.43 2 62140952 62166943

Neighbor

gene id symbol gene type direction distance location
LOC110528991 LOC106583180 coding downstream 219813 61800678 ~ 61921139 (-)
LOC110528165 LOC106583181 coding downstream 390971 61634197 ~ 61749981 (-)
LOC110528164 LOC106583182 coding downstream 583764 61542003 ~ 61557188 (-)
gpx1 gpx1 coding downstream 903957 61218553 ~ 61237064 (-)
LOC110528157 brk1 coding downstream 954102 61181265 ~ 61186850 (-)
LOC110528170 LOC106565587 coding upstream 9038 62175981 ~ 62185946 (-)
LOC110527134 LOC106583149 coding upstream 178139 62345082 ~ 62347315 (-)
LOC110528993 NA coding upstream 182159 62349102 ~ 62349904 (-)
LOC118965309 LOC106583169 coding upstream 339296 62506239 ~ 62520518 (-)
slc4a8 LOC106583168 coding upstream 371390 62538333 ~ 62589748 (-)
G632933 NA non-coding downstream 3094 62137519 ~ 62137858 (-)
G632683 NA non-coding downstream 125227 62015342 ~ 62015725 (-)
G632638 NA non-coding downstream 161872 61977726 ~ 61979080 (-)
G632544 NA non-coding downstream 293275 61846602 ~ 61847677 (-)
G632960 NA non-coding upstream 9978 62176921 ~ 62177177 (-)
G632961 NA non-coding upstream 11325 62178268 ~ 62178574 (-)
G632963 NA non-coding upstream 15157 62182100 ~ 62182299 (-)
G632991 NA non-coding upstream 50838 62217781 ~ 62218003 (-)
G632992 LOC106565589 non-coding upstream 51552 62218495 ~ 62219506 (-)
G632459 NA other downstream 449308 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 941514 61198007 ~ 61199438 (-)
G631740 NA other downstream 949907 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 1392853 60699279 ~ 60822525 (-)
G630747 NA other downstream 2057095 60083046 ~ 60083857 (-)
G632994 LOC106583176 other upstream 54329 62221272 ~ 62222445 (-)
si:dkey-28n18.9 LOC106583160 other upstream 839832 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 1618829 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 1827573 63993536 ~ 64036771 (-)

Expression


Co-expression Network