Gene
RNA
| Item | Value |
|---|---|
| gene id | G632963 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 62182100 ~ 62182299 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU719521 | True | 200 | lncRNA | 0.44 | 1 | 62182100 | 62182299 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528169 | LOC106583177 | coding | downstream | 6609 | 62159975 ~ 62175491 (-) |
| LOC110528991 | LOC106583180 | coding | downstream | 260961 | 61800678 ~ 61921139 (-) |
| LOC110528165 | LOC106583181 | coding | downstream | 432119 | 61634197 ~ 61749981 (-) |
| LOC110528164 | LOC106583182 | coding | downstream | 624912 | 61542003 ~ 61557188 (-) |
| gpx1 | gpx1 | coding | downstream | 945105 | 61218553 ~ 61237064 (-) |
| LOC110527134 | LOC106583149 | coding | upstream | 162783 | 62345082 ~ 62347315 (-) |
| LOC110528993 | NA | coding | upstream | 166803 | 62349102 ~ 62349904 (-) |
| LOC118965309 | LOC106583169 | coding | upstream | 323940 | 62506239 ~ 62520518 (-) |
| slc4a8 | LOC106583168 | coding | upstream | 356034 | 62538333 ~ 62589748 (-) |
| LOC118965401 | NA | coding | upstream | 362685 | 62544984 ~ 62545127 (-) |
| G632961 | NA | non-coding | downstream | 3526 | 62178268 ~ 62178574 (-) |
| G632960 | NA | non-coding | downstream | 4923 | 62176921 ~ 62177177 (-) |
| G632936 | NA | non-coding | downstream | 15157 | 62140952 ~ 62166943 (-) |
| G632933 | NA | non-coding | downstream | 44242 | 62137519 ~ 62137858 (-) |
| G632683 | NA | non-coding | downstream | 166375 | 62015342 ~ 62015725 (-) |
| G632991 | NA | non-coding | upstream | 35482 | 62217781 ~ 62218003 (-) |
| G632992 | LOC106565589 | non-coding | upstream | 36196 | 62218495 ~ 62219506 (-) |
| G632993 | NA | non-coding | upstream | 38002 | 62220301 ~ 62221099 (-) |
| G632994 | LOC106583176 | non-coding | upstream | 39150 | 62221272 ~ 62222445 (-) |
| G632995 | NA | non-coding | upstream | 40202 | 62222501 ~ 62222705 (-) |
| G632459 | NA | other | downstream | 490456 | 61691248 ~ 61691644 (-) |
| G631687 | emc3 | other | downstream | 982662 | 61198007 ~ 61199438 (-) |
| G631740 | NA | other | downstream | 991055 | 61190708 ~ 61191045 (-) |
| LOC110528989 | LOC106583145 | other | downstream | 1434001 | 60699279 ~ 60822525 (-) |
| G630747 | NA | other | downstream | 2098243 | 60083046 ~ 60083857 (-) |
| si:dkey-28n18.9 | LOC106583160 | other | upstream | 824476 | 62983119 ~ 63008072 (-) |
| LOC110528212 | LOC106583293 | other | upstream | 1603473 | 63785772 ~ 63827547 (-) |
| LOC110528216 | LOC106565449 | other | upstream | 1812217 | 63993536 ~ 64036771 (-) |
