G632993


Basic Information

Item Value
gene id G632993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62220301 ~ 62221099 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU719563
gtgaattgttagatactactgcgctgttggagctaggaacacaaccatttcactacacccacaataacatctgcatgtgaccaataaaatttgatcaTAGTGTCATTTGTCACTTACGCTAGCCATCTAAAATATCAGTTGAGGGTTGCCATTCACCACCATTCCCAGGGACACCCCAATGTAGCATTACATGGATGGTTTAAAATCGGGATTAACATCGTAGCTTGTTAATGCGTATGTTTTTAGAATGACACTGGATGAAATGAAAGTGTGAGAGAGCATCAACTGATGACATGATTGATATCTGATAATTTATACCTGAAGGCATTGATTACATTCTTTCTAGAATAGAGGGGGACACTGTGGGGAGTAAGAGACAACCAGTTATTTATGGCAGCAGAGCCCAAAAAACAGTCTTGCTTTGTTGATGAACATAAATACCATTATGTGCACTAAATTACAGTGTCTGTTCAATTACAACAACCATCCTGGTGCTAGTCAAACTGGCTTTTTAAAACAGAATCTAATGTTGTAAGGCTGTGGATTAATTCACTGGACCACTTTGGACGGTCAAATAAGACGTTTGAACCCTCAGATCTCATAATCTTAACGCTCATTGGGTCAAGTGTAGAGACTAGTGACTTTGGGGGGATAgatagaggagaaagaaagaaaaaggagTGAAAGAAAGGAAAACCCAAAAGTCTTCATCACTTAGTTTGAAGCACCTCTATGCGCATCGATATGTCATCATTGGGTCAAAGCCATCTAATAAAGCCTTCTGATGGGGCCGGATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU719563 True 799 lncRNA 0.40 1 62220301 62221099

Neighbor

gene id symbol gene type direction distance location
LOC110528170 LOC106565587 coding downstream 34355 62175981 ~ 62185946 (-)
LOC110528169 LOC106583177 coding downstream 44810 62159975 ~ 62175491 (-)
LOC110528991 LOC106583180 coding downstream 299162 61800678 ~ 61921139 (-)
LOC110528165 LOC106583181 coding downstream 470320 61634197 ~ 61749981 (-)
LOC110528164 LOC106583182 coding downstream 663113 61542003 ~ 61557188 (-)
LOC110527134 LOC106583149 coding upstream 123983 62345082 ~ 62347315 (-)
LOC110528993 NA coding upstream 128003 62349102 ~ 62349904 (-)
LOC118965309 LOC106583169 coding upstream 285140 62506239 ~ 62520518 (-)
slc4a8 LOC106583168 coding upstream 317234 62538333 ~ 62589748 (-)
LOC118965401 NA coding upstream 323885 62544984 ~ 62545127 (-)
G632992 LOC106565589 non-coding downstream 795 62218495 ~ 62219506 (-)
G632991 NA non-coding downstream 2298 62217781 ~ 62218003 (-)
G632963 NA non-coding downstream 38002 62182100 ~ 62182299 (-)
G632961 NA non-coding downstream 41727 62178268 ~ 62178574 (-)
G632960 NA non-coding downstream 43124 62176921 ~ 62177177 (-)
G632994 LOC106583176 non-coding upstream 350 62221272 ~ 62222445 (-)
G632995 NA non-coding upstream 1402 62222501 ~ 62222705 (-)
G632997 NA non-coding upstream 1735 62222834 ~ 62223129 (-)
G632996 LOC106583176 non-coding upstream 2120 62223219 ~ 62228447 (-)
G633006 atf7 non-coding upstream 16667 62237766 ~ 62263594 (-)
G632459 NA other downstream 528657 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 1020863 61198007 ~ 61199438 (-)
G631740 NA other downstream 1029256 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 1472202 60699279 ~ 60822525 (-)
G630747 NA other downstream 2136444 60083046 ~ 60083857 (-)
si:dkey-28n18.9 LOC106583160 other upstream 785676 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 1564673 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 1773417 63993536 ~ 64036771 (-)

Expression


Co-expression Network