G633346


Basic Information

Item Value
gene id G633346
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62503355 ~ 62504805 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU719983
CCATCTAGATTTTGGTGGAGTGATGATCTTCATTAAGTGTTATGTAGTTAGCAAAGGGGAAGAAACACTTTTTCTGGACAAACATTGACATCCTGTGACAAAATGCAAATGACAACTTTCAGCCTGTAGTGCTCAAACATGAAAGCTTTGCTTGACGCCAGAGGTGAATGTCTACATCCATCAAATACCTTCCTATCAACGTAACCTAGAAATGACATTAGGTATGTTTCTGAAATGTCTTAACTCTATGTGACTATACACCTCAGTAACAGGTCCTTTCTCCAGACCCCCCTCTACTTTGTGTTTTCTATAGTAGCCGTGTACAGCTGCTGGGCCTCTATACACCTCACTGTGCCTATTATAATACTGATCTATTACCTCAGGACACAGTGGTGAAAACAACATCAGAGCCTCAAGAACCACCAAAAATATCACAACTGAAGAACCCCCTTTACTCTAAATATGCCCATTTTTCATAATATATGTTGTTTTTATGGCTATAGGTTAAACAGGGCATTGGATAAGCAACATAGTTattgaatatatttgcaaaataTGTTTATTCTGTAGCTAAGGGCTATTACTGTAGCTGCTTTGTTCCacgcagacagacatactgtacatgtccaAGGCTACCACATCATCCTGGGTATAAAGTGTGCCATATATGATATCCCtcttatacatttgcaaactgtTGGGGCTCAGAATCTCTATCTTTAACATTCAGttcaaatataatttaaaaatcCTTCCAGATCCAAAGAACATTAACAGTATTTTGCAGAGAGGTTGTGCTAGTAAGTGTCCTAGGTTACAGACCTTCATACATATTTCAGTTGTTTCAACAGCTCTTGAATCATCTGCACCAGAAAAACATTCACAATAACAAAATATGTACACAGTGGATTGCATCAGTGccaaataataatttaatataAACTTTTGTTAGCATTAAGCATTTACCTTTTTGTTAGCATTATAGAATTGTATCAGTTCTGAGTGCTGACTCTGTGAAGGGCTGAGGAAATAGTTTCACAATCCAGAAAATTGATGAACTGGAAAAGCGCTTAGCAACAAGTACATTAACACTCATAATGCAATGTGCATTAAGTCACAATTACTAATAATAAGGTTAGCCTGGCCTCCTTTTGTTGTTGTCCCAAGTTGATGTTCTTCAGCGTCATCAATATGAAGGTGTACGTGGAGATAAGTTTGTCCAACAAAAGTGGGATTTCAACACTATCTTTTTAATACAGTAGTATTATTATTGTATCTTGTACATTCTCTAGCCATTTCTACCTCATTTTTAAGACGGTCATGGAAATATTTATTTCCTGTTGTTTCACATGTCTGTTATGGAATAATGATGATTCTTGAACTGTTTTAGTCTACCTCACAAAAGgctattttaaaataaaaatgtttaatgGAAATGAAGAGATAATGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU719983 True 1451 lncRNA 0.36 1 62503355 62504805

Neighbor

gene id symbol gene type direction distance location
LOC110528993 NA coding downstream 153451 62349102 ~ 62349904 (-)
LOC110527134 LOC106583149 coding downstream 156040 62345082 ~ 62347315 (-)
LOC110528170 LOC106565587 coding downstream 317409 62175981 ~ 62185946 (-)
LOC110528169 LOC106583177 coding downstream 327864 62159975 ~ 62175491 (-)
LOC110528991 LOC106583180 coding downstream 582216 61800678 ~ 61921139 (-)
LOC118965309 LOC106583169 coding upstream 1434 62506239 ~ 62520518 (-)
slc4a8 LOC106583168 coding upstream 33528 62538333 ~ 62589748 (-)
LOC118965401 NA coding upstream 40179 62544984 ~ 62545127 (-)
LOC110528181 LOC106583167 coding upstream 107964 62612769 ~ 62616742 (-)
LOC110528182 LOC106583165 coding upstream 142177 62646982 ~ 62822425 (-)
G633347 NA non-coding downstream 1896 62499490 ~ 62501459 (-)
G633054 LOC106583173 non-coding downstream 198662 62304243 ~ 62304693 (-)
G633006 atf7 non-coding downstream 239761 62237766 ~ 62263594 (-)
G632996 LOC106583176 non-coding downstream 274908 62223219 ~ 62228447 (-)
G632997 NA non-coding downstream 280226 62222834 ~ 62223129 (-)
G633425 NA non-coding upstream 102307 62607112 ~ 62607360 (-)
G633712 NA non-coding upstream 113084 62617889 ~ 62618485 (-)
G633722 NA non-coding upstream 116127 62620932 ~ 62621508 (-)
G633711 NA non-coding upstream 117013 62621818 ~ 62622144 (-)
G632994 LOC106583176 other downstream 281305 62221272 ~ 62222445 (-)
G632459 NA other downstream 811711 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 1303917 61198007 ~ 61199438 (-)
G631740 NA other downstream 1312310 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 1755256 60699279 ~ 60822525 (-)
si:dkey-28n18.9 LOC106583160 other upstream 501970 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 1280967 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 1489711 63993536 ~ 64036771 (-)
G635167 NA other upstream 1527641 64032446 ~ 64035381 (-)

Expression


Co-expression Network