G633312


Basic Information

Item Value
gene id G633312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62555054 ~ 62566367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU719946
atttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcatagGTACAcctcaacaatgacagacaaaatgagaaaaaaaatccagaaaatcacattgtaggattttttatgaatttatctgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcattacctgtattaatggcacctgtttgaacttgttatc
>TU719947
atttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacgaaatgagaaaaaaatccagaaaatcacattgtaggattttttatgaatttatctgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcattacctgtattaatggcacctgtttgaacttgttatc
>TU719948
atttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacgaaatgagaaaaaaaaatccagaaaatcacattgtaggattttttatgaatttatctgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcattacctgtattaatggcacctgtttgaacttgttatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU719946 False 295 lncRNA 0.37 2 62555054 62566367
TU719947 False 294 lncRNA 0.37 2 62555054 62566367
TU719948 True 296 lncRNA 0.36 2 62555054 62566367

Neighbor

gene id symbol gene type direction distance location
LOC110528177 LOC106583170 coding upstream 72447 62366941 ~ 62482607 (+)
LOC110528175 LOC105017014 coding upstream 213035 62325429 ~ 62342019 (+)
LOC110528174 LOC106583173 coding upstream 235943 62241985 ~ 62319111 (+)
LOC110528172 LOC106583174 coding upstream 316571 62231721 ~ 62238483 (+)
LOC110528171 LOC106583176 coding upstream 327036 62194655 ~ 62228018 (+)
LOC110528183 NA coding downstream 274548 62840915 ~ 62843329 (+)
LOC110528184 NA coding downstream 294182 62860549 ~ 62864970 (+)
LOC110528186 LOC106583163 coding downstream 309657 62876024 ~ 62878348 (+)
LOC118965310 NA coding downstream 312768 62879135 ~ 62881941 (+)
LOC118965311 NA coding downstream 422114 62988481 ~ 63012558 (+)
G633275 NA non-coding upstream 15563 62533222 ~ 62539491 (+)
G633272 NA non-coding upstream 52346 62502473 ~ 62502708 (+)
G633264 NA non-coding upstream 57160 62497482 ~ 62497894 (+)
G632858 NA non-coding upstream 211323 62343497 ~ 62343731 (+)
G632810 NA non-coding upstream 230969 62321144 ~ 62324085 (+)
G633419 NA non-coding downstream 38732 62605099 ~ 62605395 (+)
G633424 NA non-coding downstream 40798 62607165 ~ 62607679 (+)
G633426 NA non-coding downstream 41804 62608171 ~ 62608381 (+)
G633431 NA non-coding downstream 55395 62621762 ~ 62622445 (+)
G633443 NA non-coding downstream 66384 62632751 ~ 62633041 (+)
G632817 NA other upstream 225993 62245920 ~ 62329061 (+)
G632809 LOC100194703 other upstream 323705 62230515 ~ 62231349 (+)
G632776 NA other upstream 415063 62139516 ~ 62139991 (+)
G632146 NA other upstream 863407 61691281 ~ 61691647 (+)
G633613 NA other downstream 363031 62929398 ~ 62929699 (+)
LOC110528206 hoxc6 other downstream 1053986 63619980 ~ 63622602 (+)
LOC110528222 LOC106583247 other downstream 1629674 64099788 ~ 64201232 (+)
G635332 LOC100380681 other downstream 1751833 64318200 ~ 64326259 (+)
G635635 NA other downstream 2218849 64785216 ~ 64786393 (+)

Expression


Co-expression Network