G633424


Basic Information

Item Value
gene id G633424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62607165 ~ 62607679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU720070
gatagccaagggCATGcgccaacactcagatataatttacaaacaaagcatgtgtttagtgagtccgtcagatcagagacattagggatgaccagggatgttctcttgataagtgtgtgaattggaccattttcctgtcctgctaagcattcaaaatgtaatgagtacttttgggtgtcagggaaaatgtatggagtaaaaaagcacaattttctttaggaatgtagtgaagtaaaagataaatagtaaagtacagaaaaAAACAACTTTTGCTGCTCtagccccttgctttagctactgtcataGAGTTTGTTAAATATTTTCATAACGAagctgataaaacacacaggtgctgaatcaaggtgacttacaaagatgaggaccaagagcaagaggGGGAGCGCGGTGATGTGGTGTTCACAACTAAataatcattgtggaatctgaaaagacaccTATCCCGAAAACATGATGGTGTACTTACTACGTGCACATGCTAAAAGAAAGGAACGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU720070 True 515 lncRNA 0.39 1 62607165 62607679

Neighbor

gene id symbol gene type direction distance location
LOC110528177 LOC106583170 coding upstream 124558 62366941 ~ 62482607 (+)
LOC110528175 LOC105017014 coding upstream 265146 62325429 ~ 62342019 (+)
LOC110528174 LOC106583173 coding upstream 288054 62241985 ~ 62319111 (+)
LOC110528172 LOC106583174 coding upstream 368682 62231721 ~ 62238483 (+)
LOC110528171 LOC106583176 coding upstream 379147 62194655 ~ 62228018 (+)
LOC110528183 NA coding downstream 233236 62840915 ~ 62843329 (+)
LOC110528184 NA coding downstream 252870 62860549 ~ 62864970 (+)
LOC110528186 LOC106583163 coding downstream 268345 62876024 ~ 62878348 (+)
LOC118965310 NA coding downstream 271456 62879135 ~ 62881941 (+)
LOC118965311 NA coding downstream 380802 62988481 ~ 63012558 (+)
G633419 NA non-coding upstream 1770 62605099 ~ 62605395 (+)
G633296 NA non-coding upstream 10276 62529960 ~ 62596889 (+)
G633312 NA non-coding upstream 40798 62555054 ~ 62566367 (+)
G633275 NA non-coding upstream 67674 62533222 ~ 62539491 (+)
G633272 NA non-coding upstream 104457 62502473 ~ 62502708 (+)
G633426 NA non-coding downstream 492 62608171 ~ 62608381 (+)
G633431 NA non-coding downstream 14083 62621762 ~ 62622445 (+)
G633443 NA non-coding downstream 25072 62632751 ~ 62633041 (+)
G633445 NA non-coding downstream 28871 62636550 ~ 62636813 (+)
G633448 NA non-coding downstream 31921 62639600 ~ 62640738 (+)
G632817 NA other upstream 278104 62245920 ~ 62329061 (+)
G632809 LOC100194703 other upstream 375816 62230515 ~ 62231349 (+)
G632776 NA other upstream 467174 62139516 ~ 62139991 (+)
G632146 NA other upstream 915518 61691281 ~ 61691647 (+)
G633613 NA other downstream 321719 62929398 ~ 62929699 (+)
LOC110528206 hoxc6 other downstream 1012674 63619980 ~ 63622602 (+)
LOC110528222 LOC106583247 other downstream 1588362 64099788 ~ 64201232 (+)
G635332 LOC100380681 other downstream 1710521 64318200 ~ 64326259 (+)
G635635 NA other downstream 2177537 64785216 ~ 64786393 (+)

Expression


Co-expression Network