G633563


Basic Information

Item Value
gene id G633563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62810290 ~ 62814425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU720217
cacacacacacacacacacacacacacacacacacacatcaaagcgAGCTGTGCTTTTTGAAGTCCATGTGGACAGGAGTGATACTGGCGATAGCACCATAGAATCGCAGTGTTAACACAATAAGAAACATCTTCAgtggaacacactgtgtaaacaggCAGGATTTACTGAGGTGATGTGATGCTGCGTGAGCTGCTATAGTAGAATGAGATGGGAGTATACCATTCTCTTACCTCTGaactttttgggggggttgttcAGGTCCCCTGTGTCGGGCTGTACCACACAGCGGTCATCTACCAGCCTGTGGAGGGAAGAGAC

Function

NR:

description
PREDICTED: inositol 1,4,5-trisphosphate receptor type 1 isoform X10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU720217 True 322 lncRNA 0.48 2 62810290 62814425

Neighbor

gene id symbol gene type direction distance location
LOC110528177 LOC106583170 coding upstream 327683 62366941 ~ 62482607 (+)
LOC110528175 LOC105017014 coding upstream 468271 62325429 ~ 62342019 (+)
LOC110528174 LOC106583173 coding upstream 491179 62241985 ~ 62319111 (+)
LOC110528172 LOC106583174 coding upstream 571807 62231721 ~ 62238483 (+)
LOC110528171 LOC106583176 coding upstream 582272 62194655 ~ 62228018 (+)
LOC110528183 NA coding downstream 26490 62840915 ~ 62843329 (+)
LOC110528184 NA coding downstream 46124 62860549 ~ 62864970 (+)
LOC110528186 LOC106583163 coding downstream 61599 62876024 ~ 62878348 (+)
LOC118965310 NA coding downstream 64710 62879135 ~ 62881941 (+)
LOC118965311 NA coding downstream 174056 62988481 ~ 63012558 (+)
G633513 NA non-coding upstream 68703 62740860 ~ 62741587 (+)
G633454 NA non-coding upstream 162548 62647134 ~ 62647742 (+)
G633448 NA non-coding upstream 169552 62639600 ~ 62640738 (+)
G633445 NA non-coding upstream 173477 62636550 ~ 62636813 (+)
G633443 NA non-coding upstream 177249 62632751 ~ 62633041 (+)
G633577 NA non-coding downstream 14068 62828493 ~ 62835591 (+)
G633591 NA non-coding downstream 73442 62887867 ~ 62888419 (+)
G633626 NA non-coding downstream 134265 62948690 ~ 62948925 (+)
G633643 NA non-coding downstream 147981 62962406 ~ 62962852 (+)
G632817 NA other upstream 481229 62245920 ~ 62329061 (+)
G632809 LOC100194703 other upstream 578941 62230515 ~ 62231349 (+)
G632776 NA other upstream 670299 62139516 ~ 62139991 (+)
G632146 NA other upstream 1118643 61691281 ~ 61691647 (+)
G633613 NA other downstream 114973 62929398 ~ 62929699 (+)
LOC110528206 hoxc6 other downstream 805928 63619980 ~ 63622602 (+)
LOC110528222 LOC106583247 other downstream 1381616 64099788 ~ 64201232 (+)
G635332 LOC100380681 other downstream 1503775 64318200 ~ 64326259 (+)
G635635 NA other downstream 1970791 64785216 ~ 64786393 (+)

Expression


Co-expression Network