G633809


Basic Information

Item Value
gene id G633809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62811424 ~ 62812920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU720494
gaggagcattctctcactgtctcaacaggtgatattcctgtttgaggagtaTGCCGTCACTGTCTCAACAGgtgatattcctgtttgaggagcatgctctcactgcccCAACAGGTGATATTCTGCCATGtgctctccaaccttgttcctgcagctacccagtactaaATTTAGGAAACCAATTGAAATCTGTTTGTGAACattgatagtaacatgttttcacattgaAACATATTTCACTAAATTGACAGCCCGTCAGCATGCTGGAGAaaggaataaaggagagaggagcatttcactacacccgcaataacatccgctaatcacgtgtatgtgaccaataacatttgatttggaaatgcatggtggtgagatattctgtatagctaaaggtaatgtgtcacccaattaattatgaaaatataaaaatTCCCTATTAAGCTATtcaaaccaaacaaaccaaatacaaattcactaattgtaggctaactgtaAGCCGCACTGCACAAttaatgaaccaacagcatcgcctagactcgttctctcccagactcatagATAGCAGTTTTAGAgtgtagcataaggtaaccagtccatccagtatgcataataatacagtccacactcaaaagGCGTTTACTCAAATTGTTTAATTTTGgagtataggctagaccaattatgtaccgaAGACCTCTTAAATCAGTTTTGGTTTATGTTTTTCTGCTATGTGTAATATGTGGTAGGCTATGTATTGGCTATAACTCCAGTATGTAGATAGGAGGCAGGGCACAATCATAATTTGTGTTGAGTTTTTGTTTTTTCAGGCTTGATTCATTCAGAACTTCCAtacagcaaagcatccccaaaccatcacactaccaccaccacgcttcaccgttgggatgagGTCCTTACTGTGGaatcatcacactaccaccaccacgcttcaccgttgggatgagGTCCTTACTGTGGaatcatcacactaccaccaccacgcttcactgttGGTATGAGGTCCTTATGGAATGTTTGGTTTTTgaccaggcataatgggacccatgtttTCCAAAAAGTTTtacttttgactcatctgtccatagaccattcttccaagagtcttgatgatcatctaGGTGCTTCCAGGTACTTTTTGGCAAACTTTTTGGATgagaaaaaccaaacactgcattccacagtaagaacctcataccaacggtcaaacatggtggtggtagtgtgatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU720494 True 1246 lncRNA 0.41 4 62811424 62812920

Neighbor

gene id symbol gene type direction distance location
LOC110528181 LOC106583167 coding downstream 194682 62612769 ~ 62616742 (-)
slc4a8 LOC106583168 coding downstream 221676 62538333 ~ 62589748 (-)
LOC118965401 NA coding downstream 266297 62544984 ~ 62545127 (-)
LOC118965309 LOC106583169 coding downstream 290906 62506239 ~ 62520518 (-)
LOC110528993 NA coding downstream 461520 62349102 ~ 62349904 (-)
LOC110528187 LOC106583162 coding upstream 69366 62882286 ~ 62900930 (-)
si:dkey-28n18.9 LOC106583160 coding upstream 170199 62983119 ~ 63008072 (-)
LOC110528994 LOC106583141 coding upstream 315270 63128190 ~ 63142500 (-)
LOC110528195 LOC106565465 coding upstream 477907 63290827 ~ 63297342 (-)
nr1d4b LOC106583303 coding upstream 506220 63319140 ~ 63332492 (-)
LOC110528182 LOC106583165 non-coding downstream 163698 62646982 ~ 62822425 (-)
G633728 NA non-coding downstream 179263 62631926 ~ 62632161 (-)
G633711 NA non-coding downstream 189280 62621818 ~ 62622144 (-)
G633722 NA non-coding downstream 189916 62620932 ~ 62621508 (-)
G633712 NA non-coding downstream 192939 62617889 ~ 62618485 (-)
G633715 NA non-coding upstream 27972 62840892 ~ 62881773 (-)
G633865 NA non-coding upstream 114635 62927555 ~ 62927951 (-)
G633877 NA non-coding upstream 126749 62939669 ~ 62939896 (-)
G633878 NA non-coding upstream 127435 62940355 ~ 62940557 (-)
G633880 NA non-coding upstream 128669 62941589 ~ 62941908 (-)
G632994 LOC106583176 other downstream 589374 62221272 ~ 62222445 (-)
G632459 NA other downstream 1119780 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 1611986 61198007 ~ 61199438 (-)
G631740 NA other downstream 1620379 61190708 ~ 61191045 (-)
LOC110528212 LOC106583293 other upstream 972852 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 1181596 63993536 ~ 64036771 (-)
G635167 NA other upstream 1219526 64032446 ~ 64035381 (-)
G636055 LOC100380681 other upstream 1505274 64318194 ~ 64326230 (-)

Expression


Co-expression Network