XLOC_002550


Basic Information

Item Value
gene id XLOC_002550
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 5788620 ~ 5821584 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005989
atgatttctccactcaaatgaatggcggcttggacccggaaacagtattacatacgtcaccacttaacaagtggattaaACCAGTAAATGCTGCTGGAGTGTGTGTCAGAGCAGCTCTGGAGATCATCGGCAGATCCTAAATGTTCTGATGGGTTGGTAGTTGAATGTTCTGATGGGTCAGATCCTGAATGTTCTGATTTGGTCTGAGATTgaatgctctgattggtcagtacctggatgttCTGAATGGTCAGATCCTgaatgctctgattggtcagtgcctggatgttctgattggtcagatcctgaatgttctgattggtcagtggcTGAacgttctgattggtcagagccTGGATGTTGATTGGTCAGTGCTTAGTGCTCTGCCCGGTCCGATCCTGAATGTTCTGATTGATCAGTGGttgaatgttctgattggtcaaatccTGGATGTTCTGTTTGCTTACCACTTGATTGTTCTGATCGGTCAGATCCTGATTGGTCAGTTGTTTTTCTGGTAGATCAGTGCCTGGATGTTCTGATTGGCCTGAGCTTAGTCAGTGTTCTGCTTGGTCAGATACTgaatgctctgattggtcagaggcTGGATGTTCTGATTTATCAGTGCCTGATTGGTCAGTGGTTaaatgctctgattggtcagatactGCATGTTCTGATTGCTTAGTGCTTGATAGTTCTGATTGGTTAGTGCTTAGTCAGTGTTCCGATTGCTTAGATCCTGGATGTTCTGATTGATCAGTGCCTGATTGTTTTGCTTGGTCAGTGGTTgaatgctctgattggtcagctactGCATGTTCTGATTGCTTAGTGCTTGATTGTTCTGATTGATCAGTGTCTGATTGTTTTGATTGATCAATCAGAACATTAAACCACtgatcaatcaaatcaatcagacACTGATCATCAATCAGAACATTAAACCACTGACAGTGTCTgattgttctgattggtcagtggtGTAATGTTCTGCTTGGTCAGTGCTTAGTCAAGTCATAACCTGGATATTCTTATTGGTCAGGggaatgttctgattggtcagcgttCTGATTGGCCAGCGGTTTaatcttctgattggtcagctgttAGTCAGTGTTCTAATTGGTCAGTGGTTAATGTTCAGAGCTTTAAAACTTCACAGTCTCAAGTTGAGATGTCATTTCTCTTGCTTTGTTAGTTTTCTtaagaaaacaatgaaaaaaagtgcCAAGTTGCACGTTATTTTTACGTTATTGACAAGTATTACTGATCATATTTCAAATATTCCTCGTTTTACCCATACGCAACAGGATGTGAGCTCTAGCTTGAGTTAACCTTGTATCCGTGGTTCTCGTGATCTCCAATATAAACTAACACtacatttaaaatggcatttatgAAATGCAAATGTTTCACCGTATGCCTTTTCTACATGTATCTCTGTGTGATATCATTTCTGTCATAGCATCACTTATGTGTATATCGCTGATACTAAGGTCTAATAAAGACTTTATCCAAACGTCCTCTAA
>TCONS_00004749
GGCGAACAGACATAACTTCATCATTCGCGATGTCTTCAAATTTACAGTAATAATATGATTACACAAAGACACCAGGCTTGATGTGACCATGGACACTTCACATCATTGGCTGTTGGTCTTGATGCTCTTGCATTATGCAAAAGGTTCCAACAGTAGCTGTGTATTAAAAATTCTTCCAGACTCCAAGACTAAGATTCCTGTTGAGTTGGAAAGAAACTTCACAGCGACATGCCACCTCCAGGGTGGATCTGAATTTACCTCAAATGACATCAAATGGTCTTTTAGCAACAAAGAAACTACAGACATTTTATCAAAGACATTTTATCACAAAATAAATGAAACCTCCGTCAGTGTTACAGTTAACCTCAGCAAAAACATGGGTCATATGTTGATGTGTGAAGCCTCCAGAGAGTCCTTAACATACATGGGAAAATGTGCCTACGGAATCTACCTTGATGCAGGATACCCTCCGATGAAACCAAAGAATCTGACATGCATTGCTTTGCAAAGGAAGAAGGATATTTCTCCTGACCTAAATTGTTATTGGGAACCAGGATTGAGAGACCCACTGCTTGCCACCAATTATACTCTTTATGCCCAAGTAGGACAAGATTTATATAACAGCACCTGTAAACAGAGTCTTGCAAGAAGTTGCACCGTCAACCTGAGCACTTATCCTGTTCATATGACTTTGAAAGTCTGGGTTGAAGTGAAAAATTCACTGGGGTCAGAACGGTCAGACGAACACGAGTACGATTCCTTGAGTCTTGTGAAACCAAATCCACCAAATGTCGAAGTTAAAGTTGAAGAGGACTTCCCTACATCTTTTGTGGTTAAATGGGAGTATGACATTGAAGACACAACTATGCGATTCTCCAGTGCCATTAGATACTGCCAAGTAGGGTCAAGTGATTGgaaaaaggtgCCTGAGAACTACACCAATGTGCACATTACGTCGTATCGACTGCAGTCCCTAGAGCCTTACACTGAGTATGTGGTACAGATGCGATCCATCGGAGAGCACTACACCATCTGGAGTGAATGGAGCTCCAATGTTACAGTTCGCACTCCAGAAGCCAAGCCAGCAAGTCCACCAGACCTGTGGAGAATCATCCAGCACACGCCTGGGAAAAGAAACGTCACATTAATGTGGAAgCCTCCTGTGAAAGCTAATGGAAAAATGTGTAACTATTCCCTGATCATCAGTCAAGATAACCAGGCTTTTGAAAGTCACGTTATAAAAGCTGATCAGCTCAACCAGAGGTATTCACTGGAAGTGCCACCAGAAGAAAATGCCAGTATTGAAATAACTGCATTCAATTCAGCCGGAGGGTCTCCCAAAACTATTTTGTTCATTCCAAGATCAAATGACGAGTTTCTTGGCGTGGCGAGCATGAGGTGGTGGGTTCATGATGGAAAGCTTCATGTGGAATGGGGTCCTTTGAAGCAGCATCCTCCTCATGGCATTCATATCTCAGAATATCTGCTGGAGTGGGTGAATGAAAAAGATGTTCAGCCTCAGTGGCAGAGGGTTCCTAAAAATGTCAACACCACCATACTGAACGGTAATTTAGCCAAATACAAGCAGTACAACATATCAGTCTATCCAATCTACAAGTTCTATTATGATGGTCGATGGCATTTCCAAGCAGGAACACCAGTAACCAAGCCAGCCTACGTTCAGCAAGGAGCACCAGAGAAAGGCCCTACTGTCACAGATACCATTTCCAAGAAAAATAGTGTTACACTGATATGGGAGGAAATTCCACTGGACCACCGGTATGGATTCATCCAAAACTACACCATATTCTACAGGACCGGCAACGCTGAGTGGCAATCTGTGCTAGTGGCCGCTAACATCCACTCGTATGTATTGACTGATCTGGTCAGTGAACGCGACTATGTGGTTCACATCATGGCCTCGACGGAAGCTGGCTCCAAAAACGGCACCGattttaatttcaaaacaatGAAGTTCGCCGATGGAGAGGTGGAGATGATTGTAGTGCTGGTGTGCCTCGGCTTCCTGTTCCTGAGCGTCTTCACCATAATGCTCTGCCTTCGCAAGAGAGAAGTGATTAAGAAGCTGTTATGGCCGCAAGTCCCGGATCCGTCTGACAGCTCTATTGCCCACTGGTCACCTGATTTCCCTGTAAAGACCGAAATGCCCAAGGAAGACGTCAGCGTGGTGGAAGTGGACGTGTTTGACGGCAAGTCTTTGTGCGAAGAAGATAAAGTTGTTCTGCCGCTAAAGAAGGACAAGTACCTCTCCGAGGAGCACAGCAGCGGTATTGGAGGCTCGTCCTGCATGTCTTCGCCCCGCCACAGTGTTTCCGACAGCGATGAGGGCGACTCGGGCCAGACCACGGCCAGCACCGTCCAGTACTCGTCAGTGGTGGCCAGCGGATACAAGGGCCAAACCCCAAACCATCAGCCTCCAACGTTCGCCCGCTCCGAGTCCACACAACCGCTGCTGGACTGCGAGGAGCATCCAGAGAATCATCCCGGCGAGAGGAACTCTTACTTTAGACGGGGCCGAGAGCTGGAGCCGCAGAGTATCGATGAGCCTGTTTTCAGCGCGGTGCAGGAGGAAGAAGCATCTCCCGTTGTGGATGATGCGCCGGCGTTAAGTTACATGCCGCAGCAGAGCGGGTATCGACCGCAGTAAAGCAGAACTTTTCCGTAAGCTGTATAGAGCCACATTTTCACAGGGCACCTTTAAGTGCCTGGCATGAACTTTTTAGGTTGCGTTTTAATTGGATTGCAGGCTTATGCTAGACATGTATAGTAACACTAGATTGCATCCTTAAAAAGTAAATATCCGTttaaaaaacgaaacaaaacagtGAAGCTGTCTACGGTTTGATATCGCACTCACACTGCCACGTGCCTTTACTGGACGATCAGCCATTGCTGTTTATAACTGGCAATTAAAGCCACTTCCTTAAAGGggcagtttacccaaaaatgaaaattctctggTTGTTCCAAACTTTTTTGAGTTTGAATGTTGAAAAGCATGAGCCTATTGAGGTCCGTagtattgtttttattgctaCTATAGATAGCGTTGGCTACCATTTGATGAttgtttggtgttcaacagaaaaaaagaaatttgtgaaaaagtttagaaccacttgagttgaggaaatggtgaggaaatgttcacttttgggtgaactgcccctttaaaatgTTACTGTTGTTTTGAATCTTGTGTACTTTGTATAAGGACCCTTGAAATACGTTTTTTTTAGTTACCTAaactcaaatattttaaaaaattttgttttattttattgattaatcGTGAAAATCAAGTGATTACAATTAAGAAAAAGATTGTCCAGCAGAGAGTGCAGAACTAATGCCAGAATAATTGCTGTtagtgttctgattggtcagtgccTGAATATTCTTATTGGTCATATCTTGAATTTTCTGGTTGGTCAGAGCCTcaatgttctgattggtcagagctTGAATAATCTGATTGTTCAGTAGTTAGTTGGTTTtctgattggtccatgttttggTCAACGCTAATTGCTGTTAGTGTTCTAATTGGTCAGTGCTCAGCCgatgttctgattggtcagtgccAGAATATTCTGATTGGTCATTTCCTGAGTTTTCTGATTAGTCACAgcctgaatgttctgattggtcagtgccTAGTcgttgttctgattggtcagagctTGAATAATCTGATTGTTCAGTAGTTAGACagttttctgattggtcagtgctAATTGCTGTTAGTGTTCTAATTGGTCAGAGCCTGAAAATTCGGATTGGTCAGAGCCTGAATTTTTTGATTGGTCAGTCTGAAATTTCAGATTGGTCAGAGTCTGAATCTTCTGATTAGTCAGAGCCTcaatgttctgattggtcagtgctTAGCTGGAGTTCTGATTGGACAGTGACTgaattttttaatttgtcaatggCAGAACGTTCTAGTTGGTCAGTGTTTATGTAGTATTTTGAGTTTGTtcagatttctttatttttttaattatgtgagGTTTCAATTTCAAATTTCTGAGGGAAGTTACATCTgtggttaaaaataaaatttgacgATAACAATTTGAACATTTTGCTCTACTATGGAAATTAGACCAAGTCAAATATTTTATGGAACATAACTGTGTGTTCACACTAAAGACGTTGAGAGCATCAAAGTTCAATCTGGCCGCCCTGaagacaacgctgtctgcctttacTGCTCTGCTGGCGAAAGCGTCAAAATTCTCTACATTGATTTTGTATTTAAAGGGGCTGTTGCAGCATATTAGCAAATCACTTACATCCACACATAAAAACTTGCtttctagcatgaaaatgttgcacactttttttcaaattcagttaaCTTTGGAAGATCAAGATGGTGCATGtgctgtggctttgctccacttaaccAATATGTCCATTtatctgaaatattctgaagcagcaacaggggcggactggccatctggcaattctggcaaatgccagaagggccggaccaatttttaaatgtgggccggtcaggtttttttaaaatatgtattgtttttaagtgcagacagcttttaactcttgctagatgtgatattatgatgatgataataataataataaatgttaagcatttggcccaatcggcaactgccgcctggtttcaagatgggccgacccaatccgaggttacccatacataatcaaaatctggcaagaatgtcatattatttcaccatctgtagactaaatagtgaatgtgcgtgtctgtgggtggggctgtttcggtgtggtaatgtgggctggtgtgtctacagtgccagggctgaatttttgtcccagtccgcccctgagcAGCAATACTgtggtgcgtttcccaaaaccatcgttagccaactaaggtcgcaagttccttcgttacaaacatagtttgttgatttgccatttcccaaatccgtcgctccaacgaacattcgcaaacttgaGGACTTCCAACTACAGctttggagctgtagttagaaacatagttcctggctgtgttctattcccacttatcccccccaTATGCCctatttagaacattctaacattcaatgttggagttattaaaaataaaaaaagcattaaggttatctcctttaggtgtaatttgcttccaaactatttttacagttcagttttaacgATCTTCacgtttacaattgtgctcccttcgcagtgcactttgaaaacattgatgtcattttaaacacagccTCGTGGCGAAAGCTATagatgacctattatttaaaagcagaatttgttacgtctccaaagcttgtgaaaacaaaaagcatacgttaattcttttaatttattgtgGGTTTTTTATTACAATATCATTTGGACAAATCAATTTaggtttttctctaaagaagtagttactccacccagtGTCATTATGGGGGTTTaacgttataactaacatggttcaagcaatggttctgcgacagagaaactagggttttgggaaacacccgtcactacatcgttcttttcccaaacgatgcatcgtactatgatagttccgCCGCGAGTtacattgttgtttgggaaacgcacccctgtttAATACTGCCGTTATAGTTAGTATGAGATtcccttcttttaaaaaaatgcatatataataGTCACATCAGCAGGCCAGTAActgatactgtaaaaaaaacattgtaaataatcgGAAATTAGGCAATTGTGGCCAAAACTAAAGTTCTCTGAaatcctctcaagcggtggacttgaATATTACGATTTCGGCTTGCTGCCGAAATGCGTCATAACTCACTACCATAAAGTCAACtttatttcaactctcctcgactcCCACATCGCTAAAGACGCACTGCTCCTCTCCGGTTATCACCGCCCGcttccattgaaaatgaatgacttccggctactttgacgctctcgtcgCCTTCTGCCTGAACGCATGTAACTGGATAGGAGTGTTTTGGGAGTGTGTCCGCGCAGTTGATCTTGTAGAGCATGTTAATTTTTAACAGCCTTATTTTACTCATCAATTGAAGATTCCAATTTAAGAAACAATGCCGTGAGTTATTGTTCTGGGTTCTGATGTCATTCTTGCACCACTATATCTGAAATCACACCATTTGTTTTGCTGTAGAAGCTTGATAAGAGTTTATCAAGAATTGACCAATGAAACCTGCTTTATTCAGTCTCAAATATTGATTGTATTCCTGTTAAACGGGAAAACATTGGAGGGTAATTGTGTGATTATTTGTGAAATGTAACATTCTTATTGTACTTGTTGTTTCACTGCGAAGTACATTCAGACGTATAATAGTGATACATTTCTGTTACGATTTCAAGTTAAGCCAAAGTGTTGAGGAATCGTCATGCGGATGATTGAGTTTCCGCATATAGATGACAGATCTTctcttatccgcttgttaagtgtgacgtcacgcgaagcggcttccgggtccaggcgctctattcaactgaatggggagactcatgaaatggtaataataaacgtttacaaagcgattaaatactttcgaaaatcacgatcgcaatatatatgtccatgcctaatatccaaaggccagaaagtgatacattttttataaattgttaaatttttggtatttgtgatgcagcaagcccagagattgtcgTGTACactgtgattttatttaaatttaactttaatgtgtgatagtaataaaacgtgatcataaacgaatgatttctccactcaaatgaatggcggcttggacccggaaacagtattacatacgtcaccacttaacaagtggattaaACCAGTAAATGCTGCTGGAGTGTGTGTCAGAGCAGCTCTGGAGATCATCGGCAGATCCTAAATGTTCTGATGGGTTGGTAGTTGAATGTTCTGATGGGTCAGATCCTGAATGTTCTGATTTGGTCTGAGATTgaatgctctgattggtcagtacctggatgttCTGAATGGTCAGATCCTgaatgctctgattggtcagtgcctggatgttctgattggtcagatcctgaatgttctgattggtcagtggcTGAacgttctgattggtcagagccTGGATGTTGATTGGTCAGTGCTTAGTGCTCTGCCCGGTCCGATCCTGAATGTTCTGATTGATCAGTGGttgaatgttctgattggtcaaatccTGGATGTTCTGTTTGCTTACCACTTGATTGTTCTGATCGGTCAGATCCTGATTGGTCAGTTGTTTTTCTGGTAGATCAGTGCCTGGATGTTCTGATTGGCCTGAGCTTAGTCAGTGTTCTGCTTGGTCAGATACTgaatgctctgattggtcagaggcTGGATGTTCTGATTTATCAGTGCCTGATTGGTCAGTGGTTaaatgctctgattggtcagatactGCATGTTCTGATTGCTTAGTGCTTGATAGTTCTGATTGGTTAGTGCTTAGTCAGTGTTCCGATTGCTTAGATCCTGGATGTTCTGATTGATCAGTGCCTGATTGTTTTGCTTGGTCAGTGGTTgaatgctctgattggtcagctactGCATGTTCTGATTGCTTAGTGCTTGATTGTTCTGATTGATCAGTGTCTGATTGTTTTGATTGATCAATCAGAACATTAAACCACtgatcaatcaaatcaatcagacACTGATCATCAATCAGAACATTAAACCACTGACAGTGTCTgattgttctgattggtcagtggtGTAATGTTCTGCTTGGTCAGTGCTTAGTCAAGTCATAACCTGGATATTCTTATTGGTCAGGggaatgttctgattggtcagcgttCTGATTGGCCAGCGGTTTaatcttctgattggtcagctgttAGTCAGTGTTCTAATTGGTCAGTGGTTAATGTTCAGAGCTTTAAAACTTCACAGTCTCAAGTTGAGATGTCATTTCTCTTGCTTTGTTAGTTTTCTtaagaaaacaatgaaaaaaagtgcCAAGTTGCACGTTATTTTTACGTTATTGACAAGTATTACTGATCATATTTCAAATATTCCTCGTTTTACCCATACGCAACAGGATGTGAGCTCTAGCTTGAGTTAACCTTGTATCCGTGGTTCTCGTGATCTCCAATATAAACTAACACtacatttaaaatggcatttatgAAATGCAAATGTTTCACCGTATGCCTTTTCTACATGTATCTCTGTGTGATATCATTTCTGTCATAGCATCACTTATGTGTATATCGCTGATACTAAGGTCTAATAAAGACTTTATCCAAACGTCCTCTAA
>TCONS_00004750
ATGGACACTTCACATCATTGGCTGTTGGTCTTGATGCTCTTGCATTATGCAAAAGGTTCCAACAGTAGCTGTGTATTAAAAATTCTTCCAGACTCCAAGACTAAGATTCCTGTTGAGTTGGAAAGAAACTTCACAGCGACATGCCACCTCCAGGGTGGATCTGAATTTACCTCAAATGACATCAAATGGTCTTTTAGCAACAAAGAAACTACAGACATTTTATCAAAGACATTTTATCACAAAATAAATGAAACCTCCGTCAGTGTTACAGTTAACCTCAGCAAAAACATGGGTCATATGTTGATGTGTGAAGCCTCCAGAGAGTCCTTAACATACATGGGAAAATGTGCCTACGGAATCTACCTTGATGCAGGATACCCTCCGATGAAACCAAAGAATCTGACATGCATTGCTTTGCAAAGGAAGAAGGATATTTCTCCTGACCTAAATTGTTATTGGGAACCAGGATTGAGAGACCCACTGCTTGCCACCAATTATACTCTTTATGCCCAAGTAGGACAAGATTTATATAACAGCACCTGTAAACAGAGTCTTGCAAGAAGTTGCACCGTCAACCTGAGCACTTATCCTGTTCATATGACTTTGAAAGTCTGGGTTGAAGTGAAAAATTCACTGGGGTCAGAACGGTCAGACGAACACGAGTACGATTCCTTGAGTCTTGTGAAACCAAATCCACCAAATGTCGAAGTTAAAGTTGAAGAGGACTTCCCTACATCTTTTGTGGTTAAATGGGAGTATGACATTGAAGACACAACTATGCGATTCTCCAGTGCCATTAGATACTGCCAAGTAGGGTCAAGTGATTGgaaaaaggtgCCTGAGAACTACACCAATGTGCACATTACGTCGTATCGACTGCAGTCCCTAGAGCCTTACACTGAGTATGTGGTACAGATGCGATCCATCGGAGAGCACTACACCATCTGGAGTGAATGGAGCTCCAATGTTACAGTTCGCACTCCAGAAGCCAGGGAATTCCCACTGCCATTTTTGAAGTGCGTTGCACTTTGTGAAGTGGTCAATGCAAGTTTATATGAACAGACCCTTGACCTGTCAATTTTGACTAAGCCTCCTGTGAAAGCTAATGGAAAAATGTGTAACTATTCCCTGATCATCAGTCAAGATAACCAGGCTTTTGAAAGTCACGTTATAAAAGCTGATCAGCTCAACCAGAGGTATTCACTGGAAGTGCCACCAGAAGAAAATGCCAGTATTGAAATAACTGCATTCAATTCAGCCGGAGGGTCTCCCAAAACTATTTTGTTCATTCCAAGATCAAATGACGAGTTTCTTGGCGTGGCGAGCATGAGGTGGTGGGTTCATGATGGAAAGCTTCATGTGGAATGGGGTCCTTTGAAGCAGCATCCTCCTCATGGCATTCATATCTCAGAATATCTGCTGGAGTGGGTGAATGAAAAAGATGTTCAGCCTCAGTGGCAGAGGGTTCCTAAAAATGTCAACACCACCATACTGAACGGTAATTTAGCCAAATACAAGCAGTACAACATATCAGTCTATCCAATCTACAAGTTCTATTATGATGGTCGATGGCATTTCCAAGCAGGAACACCAGTAACCAAGCCAGCCTACGTTCAGCAAGGAGCACCAGAGAAAGGCCCTACTGTCACAGATACCATTTCCAAGAAAAATAGTGTTACACTGATATGGGAGGAAATTCCACTGGACCACCGGTATGGATTCATCCAAAACTACACCATATTCTACAGGACCGGCAACGCTGAGTGGCAATCTGTGCTAGTGGCCGCTAACATCCACTCGTATGTATTGACTGATCTGGTCAGTGAACGCGACTATGTGGTTCACATCATGGCCTCGACGGAAGCTGGCTCCAAAAACGGCACCGattttaatttcaaaacaatGAAGTTCGCCGATGGAGAGGTGGAGATGATTGTAGTGCTGGTGTGCCTCGGCTTCCTGTTCCTGAGCGTCTTCACCATAATGCTCTGCCTTCGCAAGAGAGAAGTGATTAAGAAGCTGTTATGGCCGCAAGTCCCGGATCCGTCTGACAGCTCTATTGCCCACTGGTCACCTGATTTCCCTGTAAAGACCGAAATGCCCAAGGAAGACGTCAGCGTGGTGGAAGTGGACGTGTTTGACGGCAAGTCTTTGTGCGAAGAAGATAAAGTTGTTCTGCCGCTAAAGAAGGACAAGTACCTCTCCGAGGAGCACAGCAGCGGTATTGGAGGCTCGTCCTGCATGTCTTCGCCCCGCCACAGTGTTTCCGACAGCGATGAGGGCGACTCGGGCCAGACCACGGCCAGCACCGTCCAGTACTCGTCAGTGGTGGCCAGCGGATACAAGGGCCAAACCCCAAACCATCAGCCTCCAACGTTCGCCCGCTCCGAGTCCACACAACCGCTGCTGGACTGCGAGGAGCATCCAGAGAATCATCCCGGCGAGAGGAACTCTTACTTTAGACGGGGCCGAGAGCTGGAGCCGCAGAGTATCGATGAGCCTGTTTTCAGCGCGGTGCAGGAGGAAGAAGCATCTCCCGTTGTGGATGATGCGCCGGCGTTAAGTTACATGCCGCAGCAGAGCGGGTATCGACCGCAGTAA

Function

GO:

id name namespace
GO:0019219 regulation of nucleobase-containing compound metabolic process biological_process
GO:0016070 RNA metabolic process biological_process
GO:0016071 mRNA metabolic process biological_process
GO:0008152 metabolic process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0000380 alternative mRNA splicing, via spliceosome biological_process
GO:0000381 regulation of alternative mRNA splicing, via spliceosome biological_process
GO:0006396 RNA processing biological_process
GO:0006397 mRNA processing biological_process
GO:0009060 aerobic respiration biological_process
GO:0006403 RNA localization biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0050657 nucleic acid transport biological_process
GO:0050658 RNA transport biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0051236 establishment of RNA localization biological_process
GO:0050684 regulation of mRNA processing biological_process
GO:0051252 regulation of RNA metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0010467 gene expression biological_process
GO:0044237 cellular metabolic process biological_process
GO:0010468 regulation of gene expression biological_process
GO:0044238 primary metabolic process biological_process
GO:0051276 chromosome organization biological_process
GO:0051028 mRNA transport biological_process
GO:0048024 regulation of mRNA splicing, via spliceosome biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0006807 nitrogen compound metabolic process biological_process
GO:1903311 regulation of mRNA metabolic process biological_process
GO:0043484 regulation of RNA splicing biological_process
GO:0045292 mRNA cis splicing, via spliceosome biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0046483 heterocycle metabolic process biological_process
GO:0008380 RNA splicing biological_process
GO:0071010 prespliceosome cellular_component
GO:0071013 catalytic step 2 spliceosome cellular_component
GO:0071565 nBAF complex cellular_component
GO:0044422 obsolete organelle part cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:1990904 ribonucleoprotein complex cellular_component
GO:0044428 obsolete nuclear part cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0044464 obsolete cell part cellular_component
GO:0070603 SWI/SNF superfamily-type complex cellular_component
GO:0030532 small nuclear ribonucleoprotein complex cellular_component
GO:0032991 protein-containing complex cellular_component
GO:1990204 oxidoreductase complex cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005623 obsolete cell cellular_component
GO:0005634 nucleus cellular_component
GO:0120114 Sm-like protein family complex cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0016604 nuclear body cellular_component
GO:0016607 nuclear speck cellular_component
GO:1902494 catalytic complex cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005684 U2-type spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component
GO:0005686 U2 snRNP cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0097525 spliceosomal snRNP complex cellular_component
GO:0031981 nuclear lumen cellular_component
GO:0043226 organelle cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0043233 organelle lumen cellular_component
GO:1904949 ATPase complex cellular_component
GO:0071004 U2-type prespliceosome cellular_component
GO:0005488 binding molecular_function
GO:0019829 ATPase-coupled cation transmembrane transporter activity molecular_function
GO:0022853 active ion transmembrane transporter activity molecular_function
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0097159 organic cyclic compound binding molecular_function
GO:1901363 heterocyclic compound binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0042625 ATPase-coupled ion transmembrane transporter activity molecular_function

KEGG:

id description
ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

ZFIN:

id description
ZDB-GENE-080104-6 Predicted to enable cytokine binding activity and cytokine receptor activity. Acts upstream of or within positive regulation of axon regeneration. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane. Is expressed in several structures, including epidermis; immune system; liver; muscle; and sensory system. Human ortholog(s) of this gene implicated in arteriosclerosis; hyper IgE recurrent infection syndrome 4; hyperandrogenism; and primary localized cutaneous amyloidosis 2. Orthologous to several human genes including IL6ST (interleukin 6 cytokine family signal transducer).

Ensembl:

ensembl_id ENSDARG00000104693

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005989 False 1532 lncRNA 0.41 1 5788620 5790151
TCONS_00004749 False 8300 mRNA 0.41 16 5788620 5821584
TCONS_00004750 True 2601 mRNA 0.47 15 5794252 5814101

Neighbor

gene id symbol gene type direction distance location
XLOC_002549 st8sia4 coding downstream 104294 5667401 ~ 5684326 (-)
XLOC_002548 syk coding downstream 207133 5533843 ~ 5581487 (-)
XLOC_002547 CU466285.1 coding downstream 261256 5525393 ~ 5527364 (-)
XLOC_002546 NA coding downstream 564678 5221915 ~ 5223942 (-)
XLOC_002545 sec31a coding downstream 652832 5092511 ~ 5135788 (-)
XLOC_002551 ankrd55 coding upstream 2175 5823759 ~ 5847904 (-)
XLOC_002552 si:ch211-281k19.2 coding upstream 30775 5852359 ~ 5855125 (-)
XLOC_002553 si:ch211-281k19.2 coding upstream 33675 5855259 ~ 5857548 (-)
XLOC_002554 CABZ01032180.1 coding upstream 128879 5950463 ~ 5950578 (-)
XLOC_002555 NA coding upstream 215297 6036881 ~ 6037746 (-)
XLOC_002540 NA non-coding downstream 866569 4919323 ~ 4922051 (-)
XLOC_002539 NA non-coding downstream 970014 4812304 ~ 4818606 (-)
XLOC_002538 NA non-coding downstream 1205600 4573554 ~ 4583020 (-)
XLOC_002556 NA non-coding upstream 567685 6389269 ~ 6409797 (-)
XLOC_002558 BX005434.1 non-coding upstream 651122 6472706 ~ 6472832 (-)
XLOC_002561 NA non-coding upstream 788573 6610157 ~ 6611065 (-)

Expression


Co-expression Network