Gene
RNA
| Item | Value |
|---|---|
| gene id | G633944 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 63042824 ~ 63050089 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein shisa-9A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU720646 | True | 384 | lncRNA | 0.38 | 2 | 63042824 | 63050089 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-28n18.9 | LOC106583160 | coding | downstream | 34752 | 62983119 ~ 63008072 (-) |
| LOC110528187 | LOC106583162 | coding | downstream | 141894 | 62882286 ~ 62900930 (-) |
| LOC110528182 | LOC106583165 | coding | downstream | 220399 | 62646982 ~ 62822425 (-) |
| LOC110528181 | LOC106583167 | coding | downstream | 426082 | 62612769 ~ 62616742 (-) |
| LOC118965401 | NA | coding | downstream | 497697 | 62544984 ~ 62545127 (-) |
| LOC110528994 | LOC106583141 | coding | upstream | 78101 | 63128190 ~ 63142500 (-) |
| LOC110528195 | LOC106565465 | coding | upstream | 240738 | 63290827 ~ 63297342 (-) |
| nr1d4b | LOC106583303 | coding | upstream | 269051 | 63319140 ~ 63332492 (-) |
| calcoco1b | calcoco1 | coding | upstream | 414294 | 63464383 ~ 63537584 (-) |
| trnar-ucu | NA | coding | upstream | 617138 | 63667227 ~ 63667316 (-) |
| G633895 | NA | non-coding | downstream | 74910 | 62967645 ~ 62967914 (-) |
| G633880 | NA | non-coding | downstream | 100916 | 62941589 ~ 62941908 (-) |
| G633878 | NA | non-coding | downstream | 102267 | 62940355 ~ 62940557 (-) |
| G633877 | NA | non-coding | downstream | 102928 | 62939669 ~ 62939896 (-) |
| G633865 | NA | non-coding | downstream | 114873 | 62927555 ~ 62927951 (-) |
| G633946 | LOC106583158 | non-coding | upstream | 37417 | 63087506 ~ 63098499 (-) |
| G633970 | NA | non-coding | upstream | 77326 | 63127415 ~ 63127996 (-) |
| G633975 | NA | non-coding | upstream | 80604 | 63130693 ~ 63131637 (-) |
| G633988 | NA | non-coding | upstream | 100233 | 63150322 ~ 63150560 (-) |
| LOC118965309 | LOC106583169 | other | downstream | 522314 | 62506239 ~ 62520518 (-) |
| G632994 | LOC106583176 | other | downstream | 820774 | 62221272 ~ 62222445 (-) |
| G632459 | NA | other | downstream | 1351180 | 61691248 ~ 61691644 (-) |
| G631687 | emc3 | other | downstream | 1843386 | 61198007 ~ 61199438 (-) |
| LOC110528212 | LOC106583293 | other | upstream | 735683 | 63785772 ~ 63827547 (-) |
| LOC110528216 | LOC106565449 | other | upstream | 944427 | 63993536 ~ 64036771 (-) |
| G635167 | NA | other | upstream | 982357 | 64032446 ~ 64035381 (-) |
| G636055 | LOC100380681 | other | upstream | 1268105 | 64318194 ~ 64326230 (-) |
| LOC110528235 | LOC106583273 | other | upstream | 1472425 | 64521769 ~ 64526166 (-) |
