Gene
RNA
| Item | Value |
|---|---|
| gene id | G633946 |
| gene name | LOC106583158 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 63087506 ~ 63098499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110528191 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU720648 | True | 439 | lncRNA | 0.51 | 5 | 63087506 | 63098499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-28n18.9 | LOC106583160 | coding | downstream | 79434 | 62983119 ~ 63008072 (-) |
| LOC110528187 | LOC106583162 | coding | downstream | 186576 | 62882286 ~ 62900930 (-) |
| LOC110528182 | LOC106583165 | coding | downstream | 265081 | 62646982 ~ 62822425 (-) |
| LOC110528181 | LOC106583167 | coding | downstream | 470764 | 62612769 ~ 62616742 (-) |
| LOC118965401 | NA | coding | downstream | 542379 | 62544984 ~ 62545127 (-) |
| LOC110528994 | LOC106583141 | coding | upstream | 29691 | 63128190 ~ 63142500 (-) |
| LOC110528195 | LOC106565465 | coding | upstream | 192328 | 63290827 ~ 63297342 (-) |
| nr1d4b | LOC106583303 | coding | upstream | 220641 | 63319140 ~ 63332492 (-) |
| calcoco1b | calcoco1 | coding | upstream | 365884 | 63464383 ~ 63537584 (-) |
| trnar-ucu | NA | coding | upstream | 568728 | 63667227 ~ 63667316 (-) |
| G633945 | NA | non-coding | downstream | 37042 | 63043246 ~ 63050464 (-) |
| G633944 | NA | non-coding | downstream | 37417 | 63042824 ~ 63050089 (-) |
| G633942 | NA | non-coding | downstream | 38701 | 63041466 ~ 63048805 (-) |
| G633941 | NA | non-coding | downstream | 39730 | 63040183 ~ 63047776 (-) |
| G633895 | NA | non-coding | downstream | 119592 | 62967645 ~ 62967914 (-) |
| G633970 | NA | non-coding | upstream | 28916 | 63127415 ~ 63127996 (-) |
| G633975 | NA | non-coding | upstream | 32194 | 63130693 ~ 63131637 (-) |
| G633988 | NA | non-coding | upstream | 51823 | 63150322 ~ 63150560 (-) |
| G634003 | NA | non-coding | upstream | 68692 | 63167191 ~ 63167411 (-) |
| LOC118965309 | LOC106583169 | other | downstream | 566996 | 62506239 ~ 62520518 (-) |
| G632994 | LOC106583176 | other | downstream | 865456 | 62221272 ~ 62222445 (-) |
| G632459 | NA | other | downstream | 1395862 | 61691248 ~ 61691644 (-) |
| G631687 | emc3 | other | downstream | 1888068 | 61198007 ~ 61199438 (-) |
| LOC110528212 | LOC106583293 | other | upstream | 687273 | 63785772 ~ 63827547 (-) |
| LOC110528216 | LOC106565449 | other | upstream | 896017 | 63993536 ~ 64036771 (-) |
| G635167 | NA | other | upstream | 933947 | 64032446 ~ 64035381 (-) |
| G636055 | LOC100380681 | other | upstream | 1219695 | 64318194 ~ 64326230 (-) |
| LOC110528235 | LOC106583273 | other | upstream | 1424015 | 64521769 ~ 64526166 (-) |
