Gene
RNA
| Item | Value |
|---|---|
| gene id | G634002 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 63167097 ~ 63167483 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU720709 | True | 387 | lncRNA | 0.40 | 1 | 63167097 | 63167483 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528193 | dtx3l | coding | upstream | 39066 | 63118564 ~ 63128031 (+) |
| LOC110528191 | LOC106565469 | coding | upstream | 55324 | 63015402 ~ 63111773 (+) |
| LOC118965311 | NA | coding | upstream | 154539 | 62988481 ~ 63012558 (+) |
| LOC110528188 | LOC106583159 | coding | upstream | 155258 | 63008145 ~ 63011839 (+) |
| LOC118965310 | NA | coding | upstream | 285156 | 62879135 ~ 62881941 (+) |
| LOC110528194 | LOC106583304 | coding | downstream | 56335 | 63223818 ~ 63288934 (+) |
| LOC110528197 | LOC106583300 | coding | downstream | 204465 | 63371948 ~ 63446380 (+) |
| LOC110527135 | hoxc13 | coding | downstream | 371407 | 63538890 ~ 63544471 (+) |
| LOC110528199 | hoxc12 | coding | downstream | 386574 | 63554057 ~ 63558322 (+) |
| LOC110528202 | hoxc11 | coding | downstream | 402320 | 63569803 ~ 63573270 (+) |
| G633708 | NA | non-coding | upstream | 28782 | 63138011 ~ 63138315 (+) |
| G633700 | NA | non-coding | upstream | 37518 | 63128804 ~ 63129579 (+) |
| G633687 | NA | non-coding | upstream | 116881 | 63043110 ~ 63050216 (+) |
| G633662 | NA | non-coding | upstream | 155243 | 62988501 ~ 63011854 (+) |
| G634004 | NA | non-coding | downstream | 311 | 63167794 ~ 63168001 (+) |
| G634011 | NA | non-coding | downstream | 7212 | 63174695 ~ 63175704 (+) |
| G634016 | NA | non-coding | downstream | 13058 | 63180541 ~ 63180858 (+) |
| G634018 | NA | non-coding | downstream | 14776 | 63182259 ~ 63182483 (+) |
| G634039 | NA | non-coding | downstream | 23862 | 63191345 ~ 63191552 (+) |
| G633613 | NA | other | upstream | 237398 | 62929398 ~ 62929699 (+) |
| LOC110528175 | LOC105017014 | other | upstream | 825132 | 62325429 ~ 62342019 (+) |
| G632817 | NA | other | upstream | 838036 | 62245920 ~ 62329061 (+) |
| G632809 | LOC100194703 | other | upstream | 935748 | 62230515 ~ 62231349 (+) |
| G632776 | NA | other | upstream | 1027106 | 62139516 ~ 62139991 (+) |
| LOC110528206 | hoxc6 | other | downstream | 452870 | 63619980 ~ 63622602 (+) |
| LOC110528222 | LOC106583247 | other | downstream | 1028558 | 64099788 ~ 64201232 (+) |
| G635332 | LOC100380681 | other | downstream | 1150717 | 64318200 ~ 64326259 (+) |
| G635635 | NA | other | downstream | 1617733 | 64785216 ~ 64786393 (+) |
| G635769 | NA | other | downstream | 1884161 | 65051644 ~ 65052156 (+) |
