Gene
RNA
| Item | Value |
|---|---|
| gene id | G634297 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 63487213 ~ 63487460 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU721033 | True | 248 | lncRNA | 0.38 | 1 | 63487213 | 63487460 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528197 | LOC106583300 | coding | upstream | 40833 | 63371948 ~ 63446380 (+) |
| LOC110528194 | LOC106583304 | coding | upstream | 198279 | 63223818 ~ 63288934 (+) |
| LOC110528193 | dtx3l | coding | upstream | 359182 | 63118564 ~ 63128031 (+) |
| LOC110528191 | LOC106565469 | coding | upstream | 375440 | 63015402 ~ 63111773 (+) |
| LOC118965311 | NA | coding | upstream | 474655 | 62988481 ~ 63012558 (+) |
| LOC110527135 | hoxc13 | coding | downstream | 51430 | 63538890 ~ 63544471 (+) |
| LOC110528199 | hoxc12 | coding | downstream | 66597 | 63554057 ~ 63558322 (+) |
| LOC110528202 | hoxc11 | coding | downstream | 82343 | 63569803 ~ 63573270 (+) |
| LOC110528201 | hoxc10 | coding | downstream | 94454 | 63576700 ~ 63586725 (+) |
| LOC110528203 | hoxc9 | coding | downstream | 109001 | 63596461 ~ 63601432 (+) |
| G634126 | NA | non-coding | upstream | 151110 | 63335673 ~ 63336103 (+) |
| G634102 | NA | non-coding | upstream | 189975 | 63296722 ~ 63297238 (+) |
| G634044 | NA | non-coding | upstream | 291625 | 63195356 ~ 63195588 (+) |
| G634039 | NA | non-coding | upstream | 295661 | 63191345 ~ 63191552 (+) |
| G634018 | NA | non-coding | upstream | 304730 | 63182259 ~ 63182483 (+) |
| G634300 | NA | non-coding | downstream | 6114 | 63493574 ~ 63493798 (+) |
| G634343 | NA | non-coding | downstream | 58195 | 63545655 ~ 63545958 (+) |
| G634536 | NA | non-coding | downstream | 112553 | 63600013 ~ 63602289 (+) |
| LOC110528204 | hoxc8 | non-coding | downstream | 118285 | 63601448 ~ 63606367 (+) |
| G633613 | NA | other | upstream | 557514 | 62929398 ~ 62929699 (+) |
| LOC110528175 | LOC105017014 | other | upstream | 1145248 | 62325429 ~ 62342019 (+) |
| G632817 | NA | other | upstream | 1158152 | 62245920 ~ 62329061 (+) |
| G632809 | LOC100194703 | other | upstream | 1255864 | 62230515 ~ 62231349 (+) |
| G632776 | NA | other | upstream | 1347222 | 62139516 ~ 62139991 (+) |
| LOC110528206 | hoxc6 | other | downstream | 132893 | 63619980 ~ 63622602 (+) |
| LOC110528222 | LOC106583247 | other | downstream | 708581 | 64099788 ~ 64201232 (+) |
| G635332 | LOC100380681 | other | downstream | 830740 | 64318200 ~ 64326259 (+) |
| G635635 | NA | other | downstream | 1297756 | 64785216 ~ 64786393 (+) |
| G635769 | NA | other | downstream | 1564184 | 65051644 ~ 65052156 (+) |
