G634924


Basic Information

Item Value
gene id G634924
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 63604631 ~ 63606312 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU721727
TCGCAACCAACATACCCTCCTTTAACTTTAAACATAAGAAATCAAGCTGATTTATACAACAAGAAATACGAAGACATACAGAGGTCATATTCAGTGCAATAAAAAACGAGTCTATTGCATCAGCACAATGTTGTAGGCTAATGATATTTAAACGCTGAAGTACAATTCTTTGTTCAATTATAACATAttggttaaataaatgtgcatTACTTAAGGCAGTTTAAGTTGTTGGGACACCAATTTCTTGTTACACCGTTCTTTAGCTGACTAGGTAGTATGGCGCAGAGACATTTGTTTGGAAGATCAATATAGGTCCTACTATACCGCCACAAAATCAGCACCATAAGTATCGTGCAATCAAATGCAATATAATGTGTTATAGGCCTACCATTGCACTGGCTTGTCCCTTCAGTGAGAATGTATAGATCAACATTGCTAATGACAAAACCGTTTTCTTGGTAGATTTCAACATCACCTCTAAGTGCATCTAGATCTACTTAGGTAGTAAAGAGTTCCCGGTCTATTAAAACGAATATAGGCTAATAATCACATAAAAATAACTTATTGCTGCCTTCTAGAATCTTACATTTTCCAGAATTAGGTCAAGAATCAAGAAATATTCTACATATGTCGAATTTCcgatttgttttgttttgatatCGGATTGAATAGGCCCGGGACCATTTGCGATCAAACGAACAGACAGCGCTCACAATGTTTACAAAATATAGgctacattacaatacacaataGTAGGCCTATATTTGTGAAAATAATAGGCGTATAGATTGAAATTTGAGACACAACAACATGAAATATCCCTTACTGGCAGAACGATCTTAACCACTGGGTCAACTGCCACCCTTTTTCCCCACCTTTGGAATTGGCAGTTATGAATAAAATAAAACTTCGATcatcccaatacacacacacaaatccacatAAAAAATACTCTAGGAAAAAAAAGTACAAAGAATTTGTATTAATAATGAACCCTTCTCCTCGAATGACAACATTGATGGAACATTTAAACATTTCCAGCCATCCTATCCTCTTGTGCATTCTGTGATATGGACATATGCGTAACAATATGATTTGCAAGTGCTTCAGGTCTTTATGTTATGAGAACCTTTGCAGCGTTTGGAGACTGTATAAGTTAAACATTATTAGTAGTTATTATCCTCATAGAGAGAGCCATTTGCTGTAATCCAGAACAGTTATTTTTCTCTCATCTTGTTGACTCAGTAAAACGGTTGTGATAAAATGTGATCTCCTTCTCCCGGGACCATCTTTCAACTTTTAAGCCATTTAACCATAAAAATAAAGATCAATAAAAATCACTCTTTGTCCTCTTCCACTCCCGTTTCCTTTttgtctccctcttctccttcaccaTCATCATTGCCTTCATCATCGcccttgccctctccctctccctcaccatcaCCATTAccctcgttctctgtctctactCTTTGACACGGAAATTGGTCCTTGATGTTCTCCTTTTTCCACTTCATCCGTCGGTTTTGGAACCAAATCTTCACCTGCCGCTCCGTCAGCCCTAAAGCGTGAGACACCTCGATCCGACGTTTACGGGTGAGGTAAGGGTTGAATAGAAATTCCTTCTCCAACTCCAGTGTTTGGTATCGACTGTAGGTCTGTCGGCCACTCCGTCTTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU721727 True 1682 lncRNA 0.38 1 63604631 63606312

Neighbor

gene id symbol gene type direction distance location
calcoco1b calcoco1 coding downstream 67047 63464383 ~ 63537584 (-)
nr1d4b LOC106583303 coding downstream 272139 63319140 ~ 63332492 (-)
LOC110528195 LOC106565465 coding downstream 307289 63290827 ~ 63297342 (-)
LOC110528994 LOC106583141 coding downstream 462131 63128190 ~ 63142500 (-)
si:dkey-28n18.9 LOC106583160 coding downstream 596559 62983119 ~ 63008072 (-)
trnar-ucu NA coding upstream 60915 63667227 ~ 63667316 (-)
smug1 smug1 coding upstream 75963 63682275 ~ 63685137 (-)
LOC110528212 LOC106583293 coding upstream 179465 63785772 ~ 63827547 (-)
LOC110528215 LOC106583288 coding upstream 294625 63900937 ~ 63962763 (-)
LOC110528216 LOC106565449 coding upstream 387224 63993536 ~ 64036771 (-)
G634945 NA non-coding downstream 8348 63596070 ~ 63596283 (-)
G634934 hoxc10 non-coding downstream 17903 63585937 ~ 63586728 (-)
G634927 NA non-coding downstream 28561 63575761 ~ 63576070 (-)
G634500 NA non-coding downstream 40876 63563413 ~ 63563755 (-)
G634459 NA non-coding downstream 73078 63531318 ~ 63531553 (-)
G634949 NA non-coding upstream 2336 63608648 ~ 63608873 (-)
G634951 NA non-coding upstream 4035 63610347 ~ 63610592 (-)
G634955 NA non-coding upstream 7212 63613524 ~ 63613765 (-)
G634962 NA non-coding upstream 20790 63627102 ~ 63627463 (-)
LOC118965309 LOC106583169 other downstream 1084121 62506239 ~ 62520518 (-)
G632994 LOC106583176 other downstream 1382581 62221272 ~ 62222445 (-)
G632459 NA other downstream 1912987 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 2405193 61198007 ~ 61199438 (-)
G635167 NA other upstream 426134 64032446 ~ 64035381 (-)
G636055 LOC100380681 other upstream 711882 64318194 ~ 64326230 (-)
LOC110528235 LOC106583273 other upstream 916202 64521769 ~ 64526166 (-)

Expression


Co-expression Network