Gene
RNA
| Item | Value |
|---|---|
| gene id | G634949 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 63608648 ~ 63608873 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU721755 | True | 226 | lncRNA | 0.36 | 1 | 63608648 | 63608873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| calcoco1b | calcoco1 | coding | downstream | 71064 | 63464383 ~ 63537584 (-) |
| nr1d4b | LOC106583303 | coding | downstream | 276156 | 63319140 ~ 63332492 (-) |
| LOC110528195 | LOC106565465 | coding | downstream | 311306 | 63290827 ~ 63297342 (-) |
| LOC110528994 | LOC106583141 | coding | downstream | 466148 | 63128190 ~ 63142500 (-) |
| si:dkey-28n18.9 | LOC106583160 | coding | downstream | 600576 | 62983119 ~ 63008072 (-) |
| trnar-ucu | NA | coding | upstream | 58354 | 63667227 ~ 63667316 (-) |
| smug1 | smug1 | coding | upstream | 73402 | 63682275 ~ 63685137 (-) |
| LOC110528212 | LOC106583293 | coding | upstream | 176904 | 63785772 ~ 63827547 (-) |
| LOC110528215 | LOC106583288 | coding | upstream | 292064 | 63900937 ~ 63962763 (-) |
| LOC110528216 | LOC106565449 | coding | upstream | 384663 | 63993536 ~ 64036771 (-) |
| G634924 | NA | non-coding | downstream | 2336 | 63604631 ~ 63606312 (-) |
| G634945 | NA | non-coding | downstream | 12365 | 63596070 ~ 63596283 (-) |
| G634934 | hoxc10 | non-coding | downstream | 21920 | 63585937 ~ 63586728 (-) |
| G634927 | NA | non-coding | downstream | 32578 | 63575761 ~ 63576070 (-) |
| G634500 | NA | non-coding | downstream | 44893 | 63563413 ~ 63563755 (-) |
| G634951 | NA | non-coding | upstream | 1474 | 63610347 ~ 63610592 (-) |
| G634955 | NA | non-coding | upstream | 4651 | 63613524 ~ 63613765 (-) |
| G634962 | NA | non-coding | upstream | 18229 | 63627102 ~ 63627463 (-) |
| G635079 | NA | non-coding | upstream | 228191 | 63837064 ~ 63837302 (-) |
| LOC118965309 | LOC106583169 | other | downstream | 1088138 | 62506239 ~ 62520518 (-) |
| G632994 | LOC106583176 | other | downstream | 1386598 | 62221272 ~ 62222445 (-) |
| G632459 | NA | other | downstream | 1917004 | 61691248 ~ 61691644 (-) |
| G631687 | emc3 | other | downstream | 2409210 | 61198007 ~ 61199438 (-) |
| G635167 | NA | other | upstream | 423573 | 64032446 ~ 64035381 (-) |
| G636055 | LOC100380681 | other | upstream | 709321 | 64318194 ~ 64326230 (-) |
| LOC110528235 | LOC106583273 | other | upstream | 913641 | 64521769 ~ 64526166 (-) |
