Gene
RNA
| Item | Value |
|---|---|
| gene id | G635246 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 64137001 ~ 64144757 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU722101 | True | 340 | lncRNA | 0.39 | 2 | 64137001 | 64144757 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528217 | LOC106583286 | coding | downstream | 53643 | 64050664 ~ 64083358 (-) |
| LOC110528216 | LOC106565449 | coding | downstream | 100230 | 63993536 ~ 64036771 (-) |
| LOC110528215 | LOC106583288 | coding | downstream | 174238 | 63900937 ~ 63962763 (-) |
| LOC110528212 | LOC106583293 | coding | downstream | 309454 | 63785772 ~ 63827547 (-) |
| smug1 | smug1 | coding | downstream | 451864 | 63682275 ~ 63685137 (-) |
| LOC110528224 | LOC106583281 | coding | upstream | 88409 | 64231750 ~ 64252407 (-) |
| LOC110528997 | timeless | coding | upstream | 127977 | 64272734 ~ 64286936 (-) |
| prph | prph | coding | upstream | 152190 | 64296947 ~ 64303825 (-) |
| LOC110528227 | LOC100380681 | coding | upstream | 173443 | 64318200 ~ 64322309 (-) |
| LOC110528229 | LOC105016959 | coding | upstream | 180869 | 64325626 ~ 64327630 (-) |
| G635187 | NA | non-coding | downstream | 98174 | 64038556 ~ 64038827 (-) |
| G635186 | NA | non-coding | downstream | 99114 | 64037563 ~ 64037887 (-) |
| G635084 | NA | non-coding | downstream | 294448 | 63842330 ~ 63842553 (-) |
| G635082 | NA | non-coding | downstream | 297050 | 63839744 ~ 63839951 (-) |
| G635080 | NA | non-coding | downstream | 298818 | 63837957 ~ 63838183 (-) |
| G636086 | LOC107662719 | non-coding | upstream | 207584 | 64352341 ~ 64352752 (-) |
| G636111 | NA | non-coding | upstream | 252311 | 64397068 ~ 64397505 (-) |
| G636139 | NA | non-coding | upstream | 300727 | 64445484 ~ 64451097 (-) |
| G635167 | NA | other | downstream | 101620 | 64032446 ~ 64035381 (-) |
| si:dkey-28n18.9 | LOC106583160 | other | downstream | 1128961 | 62983119 ~ 63008072 (-) |
| LOC118965309 | LOC106583169 | other | downstream | 1616491 | 62506239 ~ 62520518 (-) |
| G636055 | LOC100380681 | other | upstream | 173437 | 64318194 ~ 64326230 (-) |
| LOC110528235 | LOC106583273 | other | upstream | 377757 | 64521769 ~ 64526166 (-) |
| LOC110528239 | LOC106583268 | other | upstream | 526093 | 64669731 ~ 64689634 (-) |
| G636532 | LOC106583345 | other | upstream | 989493 | 65134250 ~ 65134745 (-) |
| G636533 | LOC106583345 | other | upstream | 990781 | 65135538 ~ 65135795 (-) |
