G636086 (LOC107662719)


Basic Information

Item Value
gene id G636086
gene name LOC107662719
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 64352341 ~ 64352752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU723049
aaagcaacgttatcgcaaactatgacaaaaacttgggggtttcttactggctctccctgttctgctggcactagctgagcatagagctgttctaggaaagccataagcctttctgtgttgtatgggccaatgagtggtgtgttgagaagcaaaccatcattggccattgcagcacacatggtgatatttccccccctttggcctggaacctccacagtggccctttgacctataacattccttcctctgcgccgtgttttggcaaggttaaatccagcttcatcgataaatacaaatgaatgtggtctttccagtgcttccacctccattactctctgaaaaacagttagtgcacagttttactgtagaaatgctagtgttttttttttttactgtaaatattttgtatagc

Function

NR:

description
PREDICTED: insertion element IS630 uncharacterized 39 kDa protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU723049 True 412 lncRNA 0.43 1 64352341 64352752

Neighbor

gene id symbol gene type direction distance location
LOC110528226 pmel coding downstream 6081 64338852 ~ 64346260 (-)
LOC110528229 LOC105016959 coding downstream 24711 64325626 ~ 64327630 (-)
LOC110528227 LOC100380681 coding downstream 30032 64318200 ~ 64322309 (-)
prph prph coding downstream 48516 64296947 ~ 64303825 (-)
LOC110528997 timeless coding downstream 65405 64272734 ~ 64286936 (-)
LOC110528233 LOC106583275 coding upstream 97137 64449889 ~ 64489135 (-)
LOC110528235 LOC106583273 coding upstream 169017 64521769 ~ 64526166 (-)
LOC110528237 LOC106583271 coding upstream 304159 64656911 ~ 64666144 (-)
LOC110528239 LOC106583268 coding upstream 316979 64669731 ~ 64689634 (-)
LOC110528240 LOC106583267 coding upstream 343756 64696508 ~ 64726237 (-)
LOC110528224 LOC106583281 non-coding downstream 100039 64231750 ~ 64252407 (-)
G635246 NA non-coding downstream 207584 64137001 ~ 64144757 (-)
G635244 NA non-coding downstream 211490 64133204 ~ 64140851 (-)
G635187 NA non-coding downstream 313514 64038556 ~ 64038827 (-)
G636111 NA non-coding upstream 44316 64397068 ~ 64397505 (-)
G636139 NA non-coding upstream 92732 64445484 ~ 64451097 (-)
G636219 NA non-coding upstream 192201 64544953 ~ 64545212 (-)
G636224 NA non-coding upstream 198498 64551250 ~ 64551773 (-)
G636229 NA non-coding upstream 201347 64554099 ~ 64554298 (-)
G636055 LOC100380681 other downstream 26111 64318194 ~ 64326230 (-)
G635167 NA other downstream 316960 64032446 ~ 64035381 (-)
LOC110528216 LOC106565449 other downstream 355102 63993536 ~ 64036771 (-)
LOC110528212 LOC106583293 other downstream 559561 63785772 ~ 63827547 (-)
si:dkey-28n18.9 LOC106583160 other downstream 1344301 62983119 ~ 63008072 (-)
G636532 LOC106583345 other upstream 781498 65134250 ~ 65134745 (-)
G636533 LOC106583345 other upstream 782786 65135538 ~ 65135795 (-)
G636571 LOC106583344 other upstream 881732 65209760 ~ 65236881 (-)

Expression


Co-expression Network