G636139


Basic Information

Item Value
gene id G636139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 64445484 ~ 64451097 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU723109
GTCAAACATGTAAAACGGTAATATGAAATGAAGATAGGAGTGAGGCTGAGTGGTagaaatatatatatatatatatatatctgtggaGCAGCTTAAGAAATTGATGGTAAATAAGACAActgtttttgttagttttttctTTGAAAAGATGGTGTCTTTATTGAGATGTCCTGGATAGTGGATCCAGGCTGATGGAGGGAGACATTTCTAagcagttacagtatattatcattttcccacaactttcaCTTTTAGCAtcattacaacaaaaaaaatcccttGTCTACTTTTAGACTAAAAGTTCATGAAATGATCCAAAATGTTGTTTAAGAAAATAGTAATGTTCTAGAGATTTAGTGTTTTAGTGTTGAGATCCAAAAGCAAACTCTGGCACAGAGGGACTGGACTGTAGATGTAACTACCACCCCAGTGTGACATTCTTGAGAATCCAAGAACCCTTTCACAGTTACTTTGATCTTATTTTACCTGTAATCTTGTAAAACATTAACATAAGAAAATAGTTTTCACTACCTTAAAGTGAACAGGAAAGGGTTTGTTATACACTTTCTCCCTATGTTTTACTGCAGAAGCTCACATAACAGTTTAGATGACCTCCAATATCAACCTGTGCACAAAGTTTAGATGAACTAAGACATGTCAAAGTAACTCTTAAAACTGTGTGGTCTAGATTaagaacacacaaaaaaaattcaGGTTTTGGCTTGTTAGATCTTTGTATAGATCATCTTTTATATGTAATAGACTAAATCCAAGAGCATTTTAAAATCAACAATATGGGAATCATGCAAGGGTGCCAGTTTACACTACTGTAATTGTCAGATTATTTTGTATGGAGTAAATTCCACAAGGGAACCCCACAAGTACCTTGACAAATGTGGTCCACATGAATATAGCCTACTTATATACTTTTGTCATTTTCACTCTGCACACTGTGCAATTACCATTCCCACTACTATCCTCTCACATTAATTTACAGAAACAAACCCAATGAGTAGAGGACCAAATGTATTCTGCCAAGTTGCTATGGTGGGAATGTTATGATGGTTGTAGCAAAGAAGACAACCTTGTGTTGGAAAGAAACTAAACTGCTTGATTGATATAGGCCTTTGTGCTACTAAGGGAAGAAGAGCTAGGTTGTGCATCCTAAGGATAAGGAAAACACTGATACAGATAATACAGCTGAAATGCCATTTCTAGTTTAGAGAACATATTTTGATTGAATATCCCAGAGCCCCCATCCCCACCTGTAATATGCAGTAAATATTGGACGTGCTTGAAAGACTGTAGATAAGAAGCTTGAAGTCTGTCTTGTTTCCTGGATGTGAATATATCCCTTTGTTGTAAACGAAAGCACTACGCTGTTGGGAAAAGGAAGAGCCTTCTGACATAaataatatatgtatataattaAAAGGGATACAAAAAATCCTTTCTGGGCACTACCTTACCAACAATAAATTTTGCACTATGGGACGTTCATAGCGTGAGGagtcatgttgttgtttgtgtttgtattttaCCTAATCAAGCACGAGCGTTTACAATTGAAAAAAGAACTGTCCAAGCTTCTGGCAATACACCGTGTGGATAAACTAGTCAGCCTCTCACTTCTTTTGTTACCATCACGCTTTCCTGACTTCCTTTTTGTCTGAAGCGGAGGCCTGTCCATATTCTCACGCTCTTCCTACACCCAGAAACCTGGACTGACCAGCGGCCAAAAGGCCTCATCGCCCTCCCGGGGTGATAAGTCATGTGTGTAACAAGTATCTGGACTGATGAACATTAGAACGCTTTAAACTGGAAATGCCCCTCCATCAACTTCAATCAATTTGTTATCAACTTTGACAGACTTTTGTCCTTTTGAATTTGAGCTACTTTTTGTGTTGACTGTCTAATAACACAGACAAGTTTTGCCTTTTGTGTGTTTTGAGTGAGAGTGCCCATATTAGAATGGGAAAAGGTATCCAGGGATCGTTAGCCAAAGTAGAGGATGACATGTTGTGTGCTGTAACTTTTGTAACTGCAGGAATATGCTAAACAATTTCAAAGGGAGAAAAAATGTGGTATGGGCAGTGGTTGGAAACAATTCAACTGGTCAAGTGTATATTTATTCAGATCAAATCAATGAATTTCAAAGTATGTCTACCTCACTTTAGCATTGTGAAACCTTGCTTAAAAAATTTGACAGTTAGGTTTTGTTATGAGTTAATATGTACAAACATGTAACCAGAATAGTAAACCCCAAAACATAGACTAAAGCCACAGGGTCACCTTGATCTCAGATCCAGATTGAGAAATTTACAGTGGAGTTCAAAAGAGTGACTGAAGCAAATAACTAAAGGTAATTTGTGCTGACAAATGAATAATAAATATCTGTGCCCAGGACCATTGGTTAACTCTGGTTAATGCAGTGGATAAAGTTGCATCTTGACTTTGTGTATGTATActggtatgtacagtgccttcagaaagtattcacaccgcttgactTATACCACATTTCATTGTTagaacctgaattcaaaatatatCATATCTATTTTTCctcacctatctacacacaatacaccataatgacaaagtgaaaacaggtttttagacatgtttgcgCAGTTATTGAAAGTGAAAagcagaaatatctaatttacatagtatttcacacccctgagtcaatacatgttagaatcacctttggcagcaattacagctgtgagtgagCGCTTCgcacacctggattgcacaatatttgcacattctgtttttaaattcttcaagctctgtcaagtttgtTGATTATTGcttgacagccattttcaagtcttgccatagattttcaagctgatttaagtcaactaactaagccactcaggaacattcaatgttgtcttggtaagcaactccagtgtatatttggccttgtgtttaaagttattgtcctgctgaaaggtgaatttgtctcccagtgtctattggggaaaaaaactccctagtctttgccgattacaagcatacccataacatgatgcagccaccgccaATGCTTGAAAATGTCGTGTTTTGTTTTCAGCAAACACAACTTTATTCAggacaaagttaatttctttgccatattttctgcagttttactttagtgccttattgcaaacaggatgcatgttttggattgTTTCAAAaaaattctgtacaggcttcccttcttttcactctgtcctttaggttagtgttgtggagtaactacagttgttgatcatggtgaaatccctgagcggtttccttcctctccggcaactgagttagaaaggacgcctggatctttgtaatgactgggtatAGTGATACACCAcccagtgtaattaataacttcaccatgctgaaATGGACATTCAATATCTGCCTTTTTAAATTTTtagccatctaccaataggtgtccttctttgcaaggcattggaaaacctccctggtcttcatggttgaatctgtgtttgatatTTACTGTTCGACTGAGGTACttcacagataattgtatgtggggtacagaaattAGATGGTCGTTCAACAATCATGTAAAACCCATGCAACTTGTGacttttttactcctgaacttatttaggcataccatgaaaggggttgaatacttattgactgaagacatttcagcttttcatttgtaattaatttctacaaaaaaaaaaacgggtATTGCGTGTAGGCCAATGACACTcaatttgatccattttaaattcaggctgtaacaaaatgtggaaaaagtcaaggggtgtgaatagtttctgaaggctctgtatgagAAAGTGTTTTCATATATTTAAATATGAGAGGAAAAAATCTATGTAAATAAATCCCCAAATGTTAACATTTTATAATGTTTTGGACAGGTTCTCCGCTTCTAATGTTTTTGCCCACTTTTATTTCTCTTTCATTTGTTCACGTTATGTAGATCAAATTCAACCCAATGTTGTAGTTTAATGGTTTTGCATATGAATAACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU723109 True 4026 lncRNA 0.37 2 64445484 64451097

Neighbor

gene id symbol gene type direction distance location
LOC110528226 pmel coding downstream 99224 64338852 ~ 64346260 (-)
LOC110528229 LOC105016959 coding downstream 117854 64325626 ~ 64327630 (-)
LOC110528227 LOC100380681 coding downstream 123175 64318200 ~ 64322309 (-)
prph prph coding downstream 141659 64296947 ~ 64303825 (-)
LOC110528997 timeless coding downstream 158548 64272734 ~ 64286936 (-)
LOC110528235 LOC106583273 coding upstream 70672 64521769 ~ 64526166 (-)
LOC110528237 LOC106583271 coding upstream 205814 64656911 ~ 64666144 (-)
LOC110528239 LOC106583268 coding upstream 218634 64669731 ~ 64689634 (-)
LOC110528240 LOC106583267 coding upstream 245411 64696508 ~ 64726237 (-)
LOC118965386 NA coding upstream 284837 64735934 ~ 64736697 (-)
G636111 NA non-coding downstream 47979 64397068 ~ 64397505 (-)
G636086 LOC107662719 non-coding downstream 92732 64352341 ~ 64352752 (-)
LOC110528224 LOC106583281 non-coding downstream 193182 64231750 ~ 64252407 (-)
G635246 NA non-coding downstream 300727 64137001 ~ 64144757 (-)
G636219 NA non-coding upstream 93856 64544953 ~ 64545212 (-)
G636224 NA non-coding upstream 100153 64551250 ~ 64551773 (-)
G636229 NA non-coding upstream 103002 64554099 ~ 64554298 (-)
G636230 NA non-coding upstream 105907 64557004 ~ 64557294 (-)
G636232 NA non-coding upstream 108673 64559770 ~ 64595363 (-)
G636055 LOC100380681 other downstream 119254 64318194 ~ 64326230 (-)
G635167 NA other downstream 410103 64032446 ~ 64035381 (-)
LOC110528216 LOC106565449 other downstream 448245 63993536 ~ 64036771 (-)
LOC110528212 LOC106583293 other downstream 652704 63785772 ~ 63827547 (-)
si:dkey-28n18.9 LOC106583160 other downstream 1437444 62983119 ~ 63008072 (-)
G636532 LOC106583345 other upstream 683153 65134250 ~ 65134745 (-)
G636533 LOC106583345 other upstream 684441 65135538 ~ 65135795 (-)
G636571 LOC106583344 other upstream 783387 65209760 ~ 65236881 (-)

Expression


Co-expression Network