XLOC_025514 (CR396582.1)


Basic Information

Item Value
gene id XLOC_025514
gene name CR396582.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 33407588 ~ 33407710 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050306
TAAAGCAGCAGAAATTGGCAGCTCTCTGCAATGCCACATgattgcccactgaagctaagcagggctgtacccggtcagtacctggatgggagaccacacagacaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082395

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050306 True 123 rRNA 0.53 1 33407588 33407710

Neighbor

gene id symbol gene type direction distance location
XLOC_025512 mpp2a coding upstream 28148 33345347 ~ 33379440 (+)
XLOC_025511 pyya coding upstream 62808 33340939 ~ 33344780 (+)
XLOC_025510 hspb9 coding upstream 106267 33300522 ~ 33301321 (+)
XLOC_025509 NA coding upstream 212873 33193368 ~ 33194715 (+)
XLOC_025508 CR392003.1 coding upstream 359198 33045883 ~ 33048390 (+)
XLOC_025515 gtpbp1 coding downstream 32905 33440615 ~ 33459764 (+)
XLOC_025516 CR396582.2 coding downstream 42390 33450100 ~ 33450219 (+)
XLOC_025517 NA coding downstream 152382 33560092 ~ 33573516 (+)
XLOC_025518 nacc1a coding downstream 337304 33745014 ~ 33754115 (+)
XLOC_025519 ier2a coding downstream 353839 33761549 ~ 33762726 (+)
XLOC_025429 BX649540.1 misc upstream 3158552 30248739 ~ 30249036 (+)
XLOC_025507 NA non-coding upstream 362566 33043644 ~ 33045022 (+)
XLOC_025506 NA non-coding upstream 364038 33041307 ~ 33043550 (+)
XLOC_025505 NA non-coding upstream 378561 32976882 ~ 33029027 (+)
XLOC_025521 BX649502.3 non-coding downstream 670490 34078200 ~ 34079170 (+)
XLOC_025522 NA non-coding downstream 699492 34107202 ~ 34113701 (+)
XLOC_025525 NA non-coding downstream 732653 34140363 ~ 34147094 (+)

Expression


Co-expression Network