G636522 (LOC106583345)


Basic Information

Item Value
gene id G636522
gene name LOC106583345
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 65122934 ~ 65123694 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU723525
acccaaccctgatctgtacttctccacaactttgtccctgacctgtttggagagctccttggtcttcatggtgccgcttgcttgatggtgccccttgcttagtggtgttgcagactctgggacctTTCAGAACTGGTGTATATACTgcgatcatgtgacacttagattgcacacaggtggactttatttaactaattatgtgacctctgaatgtaattggttgcaccagatcttatttagaggcttaacagcaaagggggtgaatgcaagcaccacttttccgtttaaaATTTTaggaattttttgaaacaagttcttttttccatttcacttcaccaatttggactattttgtatatgtccattacatgaaacccaaataaaaatatatttaaatgacaggttgtaatgcaacaaaatagaaaaaaagccaagggggtgaatactttcgcaaggcactgtatatacacatttgtgcactatataaggaatagggtgccatttgcggtGCAACCAATCCCTTTTTTCCCAGCCTACTCGAACTGACCTGCATGTTGACATCAGCACCGTTGTTAACTAGCAGCTCGAGGCAAAGCGCCCCGTTGGTGGAGACAGCGGCCAGGTGCAGCGGCGTGCAGCCGCGCTGGTTTGGCTGGTTGACGTTGGCGCCTCGGTTCACCAGCTCGTTGGCAACCGCCTCCTGGCCTGTGTAGCACGCCATGTGGAGCGCTGTGTTCCCAAAAGTGTTGGGCTCGTCAATCT

Function

NR:

description
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU723525 True 761 lncRNA 0.46 1 65122934 65123694

Neighbor

gene id symbol gene type direction distance location
LOC110528252 LOC106565416 coding downstream 76415 64987665 ~ 65046519 (-)
LOC110527139 LOC106583244 coding downstream 142463 64978825 ~ 64980471 (-)
LOC110528251 LOC106583255 coding downstream 180282 64927583 ~ 64942652 (-)
LOC110528998 rnpep coding downstream 195028 64917071 ~ 64927906 (-)
LOC110528250 LOC106583258 coding downstream 205507 64909653 ~ 64917427 (-)
LOC110528257 LOC106583347 coding upstream 38270 65161964 ~ 65164712 (-)
LOC110528260 LOC106583339 coding upstream 156659 65277524 ~ 65288560 (-)
LOC110528263 LOC106583335 coding upstream 184554 65308248 ~ 65323307 (-)
LOC110528264 pol3 coding upstream 201446 65325140 ~ 65327096 (-)
LOC110528265 LOC106583334 coding upstream 213504 65337198 ~ 65342766 (-)
G636514 NA non-coding downstream 9452 65113102 ~ 65113482 (-)
G636508 NA non-coding downstream 19491 65103085 ~ 65103443 (-)
G636470 LOC106583349 non-coding downstream 41417 65079986 ~ 65081517 (-)
G636495 NA non-coding downstream 47014 65075721 ~ 65075920 (-)
G636494 NA non-coding downstream 47791 65074589 ~ 65075143 (-)
G636523 NA non-coding upstream 71 65123765 ~ 65124158 (-)
G636527 NA non-coding upstream 4013 65127707 ~ 65127956 (-)
G636531 NA non-coding upstream 9573 65133267 ~ 65133655 (-)
G636534 NA non-coding upstream 12144 65135838 ~ 65136049 (-)
G636535 NA non-coding upstream 12509 65136203 ~ 65136454 (-)
LOC110528239 LOC106583268 other downstream 450918 64669731 ~ 64689634 (-)
LOC110528235 LOC106583273 other downstream 598753 64521769 ~ 64526166 (-)
G636055 LOC100380681 other downstream 796704 64318194 ~ 64326230 (-)
G635167 NA other downstream 1087553 64032446 ~ 64035381 (-)
LOC110528216 LOC106565449 other downstream 1125695 63993536 ~ 64036771 (-)
G636532 LOC106583345 other upstream 10556 65134250 ~ 65134745 (-)
G636533 LOC106583345 other upstream 11844 65135538 ~ 65135795 (-)
G636571 LOC106583344 other upstream 110790 65209760 ~ 65236881 (-)
G636719 NA other upstream 370096 65493790 ~ 65495157 (-)
G637495 NA other upstream 757318 65881012 ~ 65882556 (-)

Expression


Co-expression Network