G636532 (LOC106583345)


Basic Information

Item Value
gene id G636532
gene name LOC106583345
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 65134250 ~ 65134745 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU723535
ctgcgaCATGAAGCGGGGTCCACTTGCGGCGGCGCTCCTTGAGGTGGCAGGAGGCCCCGTGGGACAGCAGTACCTCCACGCACTGAGCATGTCCCCGCTGCGCTGCCAGGTAGAGGGCGGTGTGCCCCCCCGCGTCCCGAACATCCAGACTCACCAGCGTCTCAGACAACACCCCCAAAGCCTCACAGTGACCATTATACGCCTGGATGAGGGAAAAGGGCAGGGAATACAAGACTGTGAGAATGGCAGTGGGTCACTGTGTTAATGGGATATTTATTTCACTCCAACTCCAAACCAGCACCTCATAACAGTGTAAGAATGGGGGTCATGCGGATAAATGGGTCAATGAATTGGGTGACTGTGTTAAATGGATAGTTCACTCCAACTTTGAACTGGCACTGTAGAACAAAGAGAGGGCCGTAATAAAACTAATGTAACAGTCTAATCAGAAGTTAAACCAATAGACATAGTACAATGAAACGGAACGTCGGGCCAG

Function

NR:

description
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU723535 True 496 TUCP 0.52 1 65134250 65134745

Neighbor

gene id symbol gene type direction distance location
LOC110528252 LOC106565416 coding downstream 87731 64987665 ~ 65046519 (-)
LOC110527139 LOC106583244 coding downstream 153779 64978825 ~ 64980471 (-)
LOC110528251 LOC106583255 coding downstream 191598 64927583 ~ 64942652 (-)
LOC110528998 rnpep coding downstream 206344 64917071 ~ 64927906 (-)
LOC110528250 LOC106583258 coding downstream 216823 64909653 ~ 64917427 (-)
LOC110528257 LOC106583347 coding upstream 27219 65161964 ~ 65164712 (-)
LOC110528260 LOC106583339 coding upstream 145608 65277524 ~ 65288560 (-)
LOC110528263 LOC106583335 coding upstream 173503 65308248 ~ 65323307 (-)
LOC110528264 pol3 coding upstream 190395 65325140 ~ 65327096 (-)
LOC110528265 LOC106583334 coding upstream 202453 65337198 ~ 65342766 (-)
G636531 NA non-coding downstream 595 65133267 ~ 65133655 (-)
G636527 NA non-coding downstream 6294 65127707 ~ 65127956 (-)
G636523 NA non-coding downstream 10092 65123765 ~ 65124158 (-)
G636522 LOC106583345 non-coding downstream 10556 65122934 ~ 65123694 (-)
G636514 NA non-coding downstream 20768 65113102 ~ 65113482 (-)
G636534 NA non-coding upstream 1093 65135838 ~ 65136049 (-)
G636535 NA non-coding upstream 1458 65136203 ~ 65136454 (-)
G636536 NA non-coding upstream 2754 65137499 ~ 65137796 (-)
G636539 NA non-coding upstream 8142 65142887 ~ 65143096 (-)
G636540 NA non-coding upstream 8818 65143563 ~ 65143851 (-)
LOC110528239 LOC106583268 other downstream 462234 64669731 ~ 64689634 (-)
LOC110528235 LOC106583273 other downstream 610069 64521769 ~ 64526166 (-)
G636055 LOC100380681 other downstream 808020 64318194 ~ 64326230 (-)
G635167 NA other downstream 1098869 64032446 ~ 64035381 (-)
LOC110528216 LOC106565449 other downstream 1137011 63993536 ~ 64036771 (-)
G636533 LOC106583345 other upstream 793 65135538 ~ 65135795 (-)
G636571 LOC106583344 other upstream 99739 65209760 ~ 65236881 (-)
G636719 NA other upstream 359045 65493790 ~ 65495157 (-)
G637495 NA other upstream 746267 65881012 ~ 65882556 (-)
G637504 LOC106583318 other upstream 752191 65886936 ~ 65892402 (-)

Expression


Co-expression Network