G637533



Basic Information


Item Value
gene id G637533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 65914862 ~ 65922845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU724656
AACAAAATGCCTGTCACTCAGTCAGAGTCTGCAGCATTGCATAAAGCAAATATGGATATTCAGAACTTCTTCCGAAAGAGGCAAAAAAAGCAAGCAGTTTGAGCAAGAGGAGGCAGGTGGAGAGGGCAGAACATACAGAAAGTCAAAGTGCAGCAGAGTTAGCCACAGGTTTGTGAAGGGTTGCTAGTCTCCCTCGGCATAAGGGTTGGCTAATGCTAATGAGCTAGCATTAGTGTTCAGCATCCGTAAGCTATTGGGTGTCAGTCAGAGTTATTTAAAAATACAACTTGATATTCTAACTCTGTTTAAAATGGGCAATGTTGAGGTGGTAGAACTGATGAAATAAAATGAATCAACAAGGTCTTATAACCTATTCCATTTTACAGGTAAACATGATTGACTCATGTTTGTCTCATGCGTGactttgtaaaaataaataaatactggtCATTAAATCTGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU724656 True 461 lncRNA 0.39 2 65914862 65922845

Neighbor


gene id symbol gene type direction distance location
LOC110528280 un119 coding downstream 43274 65867493 ~ 65871588 (-)
LOC110528278 LOC106583321 coding downstream 56910 65811441 ~ 65857952 (-)
LOC110528277 NA coding downstream 118687 65785569 ~ 65796175 (-)
LOC110528276 LOC106583323 coding downstream 170074 65720054 ~ 65744788 (-)
LOC118965313 NA coding downstream 226876 65681451 ~ 65687986 (-)
LOC110528283 tctn1 coding upstream 6335 65929180 ~ 65942126 (-)
si:dkey-81j8.6 LOC106583314 coding upstream 19356 65942201 ~ 65970185 (-)
r3hcc1 r3hcc1 coding upstream 157911 66080756 ~ 66118473 (-)
golga7 goga7 coding upstream 195821 66118666 ~ 66126878 (-)
LOC110528292 LOC106565377 coding upstream 205074 66127919 ~ 66132200 (-)
G637454 NA non-coding downstream 138437 65776188 ~ 65776425 (-)
G637452 NA non-coding downstream 140752 65773709 ~ 65774110 (-)
G637441 NA non-coding downstream 155168 65759473 ~ 65759694 (-)
G637424 NA non-coding downstream 179513 65735012 ~ 65735349 (-)
G637566 NA non-coding upstream 69185 65992030 ~ 65993165 (-)
G637595 NA non-coding upstream 116357 66039202 ~ 66065481 (-)
G637634 NA non-coding upstream 209619 66132464 ~ 66133957 (-)
G637632 NA non-coding upstream 213617 66136462 ~ 66139801 (-)
G637660 NA non-coding upstream 240149 66162994 ~ 66163208 (-)
G637504 LOC106583318 other downstream 22460 65886936 ~ 65892402 (-)
G637495 NA other downstream 32306 65881012 ~ 65882556 (-)
G636719 NA other downstream 419705 65493790 ~ 65495157 (-)
G636571 LOC106583344 other downstream 677981 65209760 ~ 65236881 (-)
G636533 LOC106583345 other downstream 779067 65135538 ~ 65135795 (-)
G637669 NA other upstream 253115 66175960 ~ 66177895 (-)
G637722 NA other upstream 353937 66276782 ~ 66277080 (-)
LOC110528300 LOC106583565 other upstream 1132809 67055190 ~ 67079126 (-)
LOC110528308 LOC106583558 other upstream 1323787 67245800 ~ 67276081 (-)
G639226 LOC106583551 other upstream 1492011 67414856 ~ 67416090 (-)

Expression



Co-expression Network